CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL007273
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL007273
T32369_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL007273-PA
RRM
8
73
VYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAAAAVDNMNDSELC
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL013948
Aedes aegypti
AAEL013948
N
0.889
CPIJ008841
Culex quinquefasciatus
CPIJ008841
N
0.875
CpipJ_CPIJ008841
Culex pipiens
CpipJ_CPIJ008841
N
0.875
AGAP009810
Anopheles gambiae
AGAP009810
N
0.833
GL11464
Drosophila persimilis
FBgn0149073
N
0.736
GJ20579
Drosophila virilis
FBgn0207718
N
0.736
GK21899
Drosophila willistoni
FBgn0223884
N
0.736
GI20843
Drosophila mojavensis
FBgn0143577
N
0.736
GH20760
Drosophila grimshawi
FBgn0128223
N
0.736
GA18502-RA
Drosophila pseudoobscura
FBgn0078504
N
0.736
GE11871
Drosophila yakuba
FBgn0229657
N
0.722
GF11346
Drosophila ananassae
FBgn0088386
N
0.722
cyp33
Drosophila melanogaster
FBgn0028382
N
0.708
GM21798
Drosophila sechellia
FBgn0176676
N
0.708
GD11288
Drosophila simulans
FBgn0183037
N
0.708
GG21795
Drosophila erecta
FBgn0113973
N
0.708