GA18502-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0078504 T43161_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0277664 RRM 8 78

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GL11464 Drosophila persimilis FBgn0149073 N 1.000
GF11346 Drosophila ananassae FBgn0088386 N 0.986
GK21899 Drosophila willistoni FBgn0223884 N 0.972
GI20843 Drosophila mojavensis FBgn0143577 N 0.958
GE11871 Drosophila yakuba FBgn0229657 N 0.958
GH20760 Drosophila grimshawi FBgn0128223 N 0.958
GJ20579 Drosophila virilis FBgn0207718 N 0.958
cyp33 Drosophila melanogaster FBgn0028382 N 0.944
GG21795 Drosophila erecta FBgn0113973 N 0.944
GD11288 Drosophila simulans FBgn0183037 N 0.944
GM21798 Drosophila sechellia FBgn0176676 N 0.930
AAEL013948 Aedes aegypti AAEL013948 N 0.845
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.831
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.831
AGAP009810 Anopheles gambiae AGAP009810 N 0.803
PPIE Anolis carolinensis ENSACAG00000002688 N 0.761
PHUM293600 Pediculus humanus PHUM293600 N 0.761
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.746
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.746
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.746
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.746
AAEL007273 Aedes aegypti AAEL007273 N 0.736
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.732
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.732
PPIE Oryzias latipes ENSORLG00000017469 N 0.732
PPIE Monodelphis domestica ENSMODG00000017659 N 0.732
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.732
PPIE Gallus gallus ENSGALG00000013383 N 0.732
ppie Danio rerio ENSDARG00000059270 N 0.732
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.732
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.732
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.732
ISCW002449 Ixodes scapularis ISCW002449 N 0.732
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.718
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.718
Ppie Mus musculus ENSMUSG00000028651 N 0.718
PPIE Pan troglodytes ENSPTRG00000000577 N 0.718
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.718
PPIE Sorex araneus ENSSARG00000005703 N 0.718
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.718
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.718
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.718
PPIE Sus scrofa ENSSSCG00000003664 N 0.718
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.718
LOC100054084 Equus caballus ENSECAG00000008955 N 0.718
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.718
PPIE Canis familiaris ENSCAFG00000003031 N 0.718
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.718
PPIE Macaca mulatta ENSMMUG00000018869 N 0.718
LOC100054282 Equus caballus ENSECAG00000024285 N 0.718
PPIE Microcebus murinus ENSMICG00000016676 N 0.718
PPIE Homo sapiens ENSG00000084072 N 0.718
PPIE Loxodonta africana ENSLAFG00000028312 N 0.718
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.718
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.718
PPIE Cavia porcellus ENSCPOG00000007365 N 0.708
AAI23372 Xenopus laevis AAI23372 N 0.704