CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AGAP009810
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP009810
T32543_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP009810-PA
RRM
8
78
VYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAAAAVDNMNDSELCGRTIR
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
68 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ008841
Culex quinquefasciatus
CPIJ008841
N
0.944
AAEL013948
Aedes aegypti
AAEL013948
N
0.944
CpipJ_CPIJ008841
Culex pipiens
CpipJ_CPIJ008841
N
0.944
AAEL007273
Aedes aegypti
AAEL007273
N
0.833
GJ20579
Drosophila virilis
FBgn0207718
N
0.817
GH20760
Drosophila grimshawi
FBgn0128223
N
0.817
GI20843
Drosophila mojavensis
FBgn0143577
N
0.817
GA18502-RA
Drosophila pseudoobscura
FBgn0078504
N
0.803
BGIBMGA003414
Bombyx mori
BGIBMGA003414
N
0.803
GE11871
Drosophila yakuba
FBgn0229657
N
0.803
GK21899
Drosophila willistoni
FBgn0223884
N
0.803
GL11464
Drosophila persimilis
FBgn0149073
N
0.803
GD11288
Drosophila simulans
FBgn0183037
N
0.789
cyp33
Drosophila melanogaster
FBgn0028382
N
0.789
GF11346
Drosophila ananassae
FBgn0088386
N
0.789
GG21795
Drosophila erecta
FBgn0113973
N
0.789
GM21798
Drosophila sechellia
FBgn0176676
N
0.789
amel4_ncbi_hmm1701
Tribolium castaneum
amel4_ncbi_hmm1701
N
0.775
amel4_ncbi_hmm1701
Apis mellifera
amel4_ncbi_hmm1701
N
0.775
ISCW002449
Ixodes scapularis
ISCW002449
N
0.761
PPIE
Gasterosteus aculeatus
ENSGACG00000007165
N
0.761
amel4_ncbi_hmm44329
Apis mellifera
amel4_ncbi_hmm44329
N
0.761
Q8QGJ6_FUGRU
Takifugu rubripes
ENSTRUG00000006308
N
0.761
PPIE
Tetraodon nigroviridis
ENSTNIG00000016901
N
0.761
PPIE
Taeniopygia guttata
ENSTGUG00000001276
N
0.746
PPIE
Monodelphis domestica
ENSMODG00000017659
N
0.746
PPIE
Gallus gallus
ENSGALG00000013383
N
0.746
XP_001175534.1
Strongylocentrotus purpuratus
XP_001175534.1
N
0.746
XP_799104.2
Strongylocentrotus purpuratus
XP_799104.2
N
0.746
PPIE
Oryzias latipes
ENSORLG00000017469
N
0.746
estExt_fgenesh2_kg.C_sca_1160007
Lottia gigantea
estExt_fgenesh2_kg.C_sca_1160007
N
0.746
PPIE
Ornithorhynchus anatinus
ENSOANG00000010003
N
0.746
PHUM293600
Pediculus humanus
PHUM293600
N
0.746
PPIE
Anolis carolinensis
ENSACAG00000002688
N
0.746
ppie
Danio rerio
ENSDARG00000059270
N
0.746
nasonia_NCBI_hmm78483
Nasonia vitripennis
nasonia_NCBI_hmm78483
N
0.732
estExt_gwp.C_5080019
Branchiostoma floridae
estExt_gwp.C_5080019
N
0.732
Aqu1.226474
Amphimedon queenslandica
Aqu1.226474
N
0.732
estExt_gwp.C_2960041
Branchiostoma floridae
estExt_gwp.C_2960041
N
0.732
PPIE
Tursiops truncatus
ENSTTRG00000014385
N
0.732
PPIE
Homo sapiens
ENSG00000084072
N
0.732
PPIE
Sus scrofa
ENSSSCG00000003664
N
0.732
PPIE
Loxodonta africana
ENSLAFG00000028312
N
0.732
PPIE
Microcebus murinus
ENSMICG00000016676
N
0.732
LOC100054282
Equus caballus
ENSECAG00000024285
N
0.732
LOC100054084
Equus caballus
ENSECAG00000008955
N
0.732
PPIE
Canis familiaris
ENSCAFG00000003031
N
0.732
LOC100400545
Callithrix jacchus
ENSCJAG00000002589
N
0.732
PPIE
Dasypus novemcinctus
ENSDNOG00000002404
N
0.732
PPIE
Myotis lucifugus
ENSMLUG00000016233
N
0.732
PPIE
Gorilla gorilla
ENSGGOG00000015783
N
0.732
Ppie
Rattus norvegicus
ENSRNOG00000014762
N
0.732
PPIE
Macaca mulatta
ENSMMUG00000018869
N
0.732
PPIE
Pteropus vampyrus
ENSPVAG00000002120
N
0.732
PPIE
Pan troglodytes
ENSPTRG00000000577
N
0.732
PPIE
Oryctolagus cuniculus
ENSOCUG00000007665
N
0.732
Ppie
Mus musculus
ENSMUSG00000028651
N
0.732
PPIE
Sorex araneus
ENSSARG00000005703
N
0.732
PPIE
Cavia porcellus
ENSCPOG00000007365
N
0.722
ENSCSAVG00000006547
Ciona savignyi
ENSCSAVG00000006547
N
0.718
ENSCING00000003116
Ciona intestinalis
ENSCING00000003116
N
0.718
AAI23372
Xenopus laevis
AAI23372
N
0.718
XP_002154334.1
Hydra magnipapillata
XP_002154334.1
N
0.718
XP_002168022.1
Hydra magnipapillata
XP_002168022.1
N
0.718
107863
Helobdella robusta
107863
N
0.704
Ame_R020475
Ailuropoda melanoleuca
Ame_R020475
N
0.704
ENSPPYG00000001501
Pongo pygmaeus
ENSPPYG00000001501
N
0.704
CAOG_01587
Capsaspora owczarzaki
CAOG_01587
N
0.704