CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM34
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000001253
T34594_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000001169
RRM
14
61
VFVGNLPVSCTEQMLKAFFREYGQIESIRFRSLIPSEDTLSKKLAAIK
ENSACAP00000001169
RRM
55
97
KKLAAIKRKFHPNRKYINAYIVFKEEHAANDALKCNGTEFCSG
ENSACAP00000001169
RRM
117
186
VFVGNLPYAIDDDTVRTHFSQCGNVMGVRIVRDQRTGIGKGFGYVLFETTDAVHLALKLNNAELEGRKLR
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM34
Loxodonta africana
ENSLAFG00000014289
N
0.727
ARID4B
Macaca mulatta
ENSMMUG00000007141
N
0.727
RBM34
Pan troglodytes
ENSPTRG00000032432
N
0.715
RBM34
Gorilla gorilla
ENSGGOG00000007924
N
0.709
RBM34
Homo sapiens
ENSG00000188739
N
0.709
A6MKB3_CALJA
Callithrix jacchus
ENSCJAG00000018125
N
0.709
RBM34
Felis catus
ENSFCAG00000001852
N
0.707
A8NJ74_BOVIN
Bos taurus
ENSBTAG00000000221
N
0.707
Ame_R015227
Ailuropoda melanoleuca
Ame_R015227
N
0.703