CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SREK1
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000016152
T34731_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000015911
RRM
4
75
IQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFRESSSVGVAQHLTNTVFIDRALI
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SREK1
Dasypus novemcinctus
ENSDNOG00000010327
N
0.931
ENSPPYG00000015515
Pongo pygmaeus
ENSPPYG00000015515
N
0.931
sfrs12
Xenopus tropicalis
ENSXETG00000021460
N
0.917
SREK1
Felis catus
ENSFCAG00000015559
N
0.875
SRSF11
Anolis carolinensis
ENSACAG00000013654
N
0.736
SRSF11
Tetraodon nigroviridis
ENSTNIG00000010494
N
0.722
SRSF11
Gasterosteus aculeatus
ENSGACG00000009346
N
0.722
SRSF11
Takifugu rubripes
ENSTRUG00000017369
N
0.722