CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCHOG00000002832
(
Choloepus hoffmanni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCHOG00000002832
T35257_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000002502
RRM
16
84
LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRLEAEEAITSFSGHKPSGSS
ENSCHOP00000002502
RRM
154
224
IFIYNLGQDADEGILWQMFGPFGTVTNVKVIRDFNTNKCKGFGFVMMTNYEEAAMAIASLNGYRLGDKILQ
Links
Other
RRM
family RBPs
Other
Choloepus hoffmanni
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ELAVL3
Ornithorhynchus anatinus
ENSOANG00000015046
N
0.757
ELAVL4
Ornithorhynchus anatinus
ENSOANG00000007377
N
0.757
ELAVL4
Loxodonta africana
ENSLAFG00000001087
I
0.757
ELAVL3
Cavia porcellus
ENSCPOG00000001793
N
0.729
elavl2
Danio rerio
ENSDARG00000040732
I
0.714
ELAVL1
Ornithorhynchus anatinus
ENSOANG00000014244
N
0.707