CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ELAVL3
(
Cavia porcellus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCPOG00000001793
T35752_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000001622
RRM
17
85
LYVSGLPKSMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAA
ENSCPOP00000001622
RRM
176
246
IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQ
ENSCPOP00000017175
RRM
17
85
LYVSGLPKSMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAA
ENSCPOP00000017175
RRM
168
238
IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQ
Links
Other
RRM
family RBPs
Other
Cavia porcellus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ELAVL3
Ornithorhynchus anatinus
ENSOANG00000015046
N
0.971
ELAVL4
Ornithorhynchus anatinus
ENSOANG00000007377
N
0.929
ELAVL4
Loxodonta africana
ENSLAFG00000001087
I
0.929
elavl2
Danio rerio
ENSDARG00000040732
I
0.836
ENSCHOG00000002832
Choloepus hoffmanni
ENSCHOG00000002832
N
0.729
ENSCING00000004712
Ciona intestinalis
ENSCING00000004712
N
0.716