CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ELAVL4
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000007377
T39493_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000011740
RRM
10
78
LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAT
ENSOANP00000011740
RRM
150
220
IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ELAVL4
Loxodonta africana
ENSLAFG00000001087
I
1.000
ELAVL3
Ornithorhynchus anatinus
ENSOANG00000015046
N
0.936
ELAVL3
Cavia porcellus
ENSCPOG00000001793
N
0.929
elavl2
Danio rerio
ENSDARG00000040732
I
0.864
ENSCHOG00000002832
Choloepus hoffmanni
ENSCHOG00000002832
N
0.757
ENSCING00000004712
Ciona intestinalis
ENSCING00000004712
N
0.716