CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCJAG00000013441
(
Callithrix jacchus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCJAG00000013441
T35597_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000024679
RRM
39
108
LFIGGLSFETTEDSLREHYEKRGTLTDCVVMGDPQTESSRGFGFVTYSCVEEVDAAMCAQPHKVDGHVVE
ENSCJAP00000024679
RRM
128
174
KIETIEVMEDRQSRKKRGFAFVTFDDHDTFDKIVVQKYHTINGHNCE
ENSCJAP00000024683
RRM
39
108
LFIGGLSFETTEDSLREHYEKRGTLTDCVVMGDPQTESSRGFGFVTYSCVEEVDAAMCAQPHKVDGHVVE
ENSCJAP00000024683
RRM
128
174
KIETIEVMEDRQSRKKRGFAFVTFDDHDTFDKIVVQKYHTINGHNCE
Links
Other
RRM
family RBPs
Other
Callithrix jacchus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCAFG00000023240
Canis familiaris
ENSCAFG00000023240
I
0.726
ENSPPYG00000001326
Pongo pygmaeus
ENSPPYG00000001326
I
0.719