CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ROD1
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000012274
T36344_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000009536
RRM
173
239
IIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPMNAHYAKMALDGQNIYNACCT
ENSDNOP00000009536
RRM
369
415
XVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLR
ENSDNOP00000009536
RRM
466
496
LHLSNIPPSVTVDDLKNLTDAGCSVKAFKFF
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ROD1
Myotis lucifugus
ENSMLUG00000006812
N
0.812
ROD1
Erinaceus europaeus
ENSEEUG00000014435
N
0.753
ENSPPYG00000019504
Pongo pygmaeus
ENSPPYG00000019504
I
0.709
ROD1
Pan troglodytes
ENSPTRG00000021263
I
0.704
ROD1
Homo sapiens
ENSG00000119314
I
0.704