CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Tmem63a
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000003334
T36429_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000003117
RRM
229
263
LFITGLPREASREAVESHFRNAYITCEVVDVQLCY
ENSDORP00000003117
RRM
333
376
RIREEQRLVQDRPLGMAFVTFREQAMATYILKDFNTCKCQGLHC
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.810
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.787
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.762
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.762
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.762
TMEM63A
Homo sapiens
ENSG00000196187
N
0.762
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.750
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.738
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.728
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.728
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.728
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.723
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.722
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.720
TMEM63A
Dasypus novemcinctus
ENSDNOG00000024203
N
0.716
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.713
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.707
A7MB88_BOVIN
Bos taurus
ENSBTAG00000002854
N
0.707
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.700