CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM45
(
Procavia capensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPCAG00000004338
T40319_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000004060
RRM
31
95
VISKYTTESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLSPND
ENSPCAP00000004060
RRM
113
186
RDVEDEELTRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFK
ENSPCAP00000004060
RRM
397
455
PHPLPLDILEDIFCRFGNLIEVYLVSGKNVGYVKYADRISANDAITTLHGKILNGVRLK
Links
Other
RRM
family RBPs
Other
Procavia capensis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM45
Echinops telfairi
ENSETEG00000013424
N
0.960
Rbm45
Dipodomys ordii
ENSDORG00000015831
N
0.930
RBM45
Microcebus murinus
ENSMICG00000003787
N
0.895
RBM45
Ochotona princeps
ENSOPRG00000002626
N
0.730