CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RNPC3
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000032342
T38146_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000025668
RRM
29
96
LLVRHLPAELTTEEKEDLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHTLV
ENSLAFP00000025668
RRM
422
497
IYVKNLAKHVQEKDLKFIFGRYVNFSSETERIMFDIRLMKEGRMKGQAFIGLPNETAAAKALREANGYVLFGKPMV
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RNPC3
Oryctolagus cuniculus
ENSOCUG00000004016
N
0.965
RNPC3
Canis familiaris
ENSCAFG00000019972
N
0.958
LOC100393797
Callithrix jacchus
ENSCJAG00000031625
N
0.958
RNPC3
Homo sapiens
ENSG00000185946
N
0.958
RNPC3
Sus scrofa
ENSSSCG00000006856
N
0.952
RBM40_BOVIN
Bos taurus
ENSBTAG00000019091
N
0.951
RNPC3
Macaca mulatta
ENSMMUG00000018039
N
0.951
Rnpc3
Mus musculus
ENSMUSG00000027981
N
0.951
Rnpc3
Rattus norvegicus
ENSRNOG00000017310
N
0.951
RNPC3
Monodelphis domestica
ENSMODG00000002946
N
0.889
RNPC3
Gallus gallus
ENSGALG00000005162
N
0.861
RNPC3
Anolis carolinensis
ENSACAG00000002029
N
0.826
RNPC3
Ornithorhynchus anatinus
ENSOANG00000008220
N
0.764
RNPC3
Gasterosteus aculeatus
ENSGACG00000002048
N
0.750
rnpc3
Danio rerio
ENSDARG00000011247
N
0.736
RNPC3
Takifugu rubripes
ENSTRUG00000001130
N
0.710