CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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THOC4
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000002210
T38161_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000002015
RRM
95
149
XELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
THOC4
Ochotona princeps
ENSOPRG00000005551
N
1.000
THOC4
Taeniopygia guttata
ENSTGUG00000003513
N
0.982
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.794
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.771
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.771
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.771
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.771
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.771
AAH92013
Xenopus laevis
AAH92013
N
0.771
Q58EA2
Xenopus laevis
Q58EA2
N
0.771
tho4
Danio rerio
ENSDARG00000077732
N
0.771
THOC4
Gallus gallus
ENSGALG00000007237
N
0.771
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.771
THOC4
Homo sapiens
ENSG00000183684
N
0.771
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.771
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.771
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.771
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.771
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.771
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.771
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.771
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.771
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.771
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.771
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.771
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.771
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.771
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.771
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.771
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.771
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.743
AAH74336
Xenopus laevis
AAH74336
N
0.743
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.743
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.729
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.714
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.714
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.700