CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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THOC4
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000003513
T41880_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000003623
RRM
1
55
QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
THOC4
Macropus eugenii
ENSMEUG00000002210
N
0.982
THOC4
Ochotona princeps
ENSOPRG00000005551
N
0.982
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.794
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.786
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.786
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.786
THOC4
Homo sapiens
ENSG00000183684
N
0.786
THOC4
Gallus gallus
ENSGALG00000007237
N
0.786
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.786
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.786
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.786
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.786
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.786
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.786
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.786
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.786
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.786
Q58EA2
Xenopus laevis
Q58EA2
N
0.786
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.786
AAH92013
Xenopus laevis
AAH92013
N
0.786
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.786
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.786
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.786
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.786
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.786
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.786
tho4
Danio rerio
ENSDARG00000077732
N
0.786
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.786
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.786
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.786
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.757
AAH74336
Xenopus laevis
AAH74336
N
0.757
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.757
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.743
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.729
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.729
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.714
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.700