CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000009555
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000009555
T38707_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000008702
RRM
73
140
LLLSNLDFRVSDADELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
104 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.929
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.929
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.929
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.929
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.929
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.929
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.929
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.929
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.929
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.929
AAH92013
Xenopus laevis
AAH92013
N
0.929
Q58EA2
Xenopus laevis
Q58EA2
N
0.929
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.929
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.929
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.929
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.929
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.929
THOC4
Gallus gallus
ENSGALG00000007237
N
0.929
tho4
Danio rerio
ENSDARG00000077732
N
0.929
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.929
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.929
THOC4
Homo sapiens
ENSG00000183684
N
0.929
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.929
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.929
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.929
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.929
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.929
AAH74336
Xenopus laevis
AAH74336
N
0.900
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.900
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.900
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.886
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.871
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.871
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.857
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.843
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.829
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.829
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.829
ENSMLUG00000009449
Myotis lucifugus
ENSMLUG00000009449
N
0.824
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.814
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.814
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.814
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.814
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.800
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.800
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.800
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.800
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.800
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.800
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.800
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.800
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.800
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.800
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.800
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.800
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.800
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.800
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.800
ISCW001860
Ixodes scapularis
ISCW001860
N
0.800
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.800
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.800
THOC4
Macropus eugenii
ENSMEUG00000002210
N
0.794
THOC4
Ochotona princeps
ENSOPRG00000005551
N
0.794
THOC4
Taeniopygia guttata
ENSTGUG00000003513
N
0.794
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.786
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.786
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.786
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.786
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.786
ENSMLUG00000006641
Myotis lucifugus
ENSMLUG00000006641
N
0.786
ENSMLUG00000010927
Myotis lucifugus
ENSMLUG00000010927
N
0.771
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.771
AGAP006733
Anopheles gambiae
AGAP006733
N
0.771
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.771
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.771
PHUM023420
Pediculus humanus
PHUM023420
N
0.771
AAEL015263
Aedes aegypti
AAEL015263
N
0.771
AAEL005114
Aedes aegypti
AAEL005114
N
0.771
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.771
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.771
XP_001185635.1
Strongylocentrotus purpuratus
XP_001185635.1
N
0.757
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.757
XP_782040.2
Strongylocentrotus purpuratus
XP_782040.2
N
0.757
GL12678
Drosophila persimilis
FBgn0150284
N
0.743
ENSORLG00000001620
Oryzias latipes
ENSORLG00000001620
N
0.743
GA10707-RA
Drosophila pseudoobscura
FBgn0070763
N
0.743
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.743
estExt_Genewise1.C_7200001
Capitella teleta
estExt_Genewise1.C_7200001
N
0.729
GG10124
Drosophila erecta
FBgn0102435
N
0.729
Q8MY63_CIOSA
Ciona savignyi
ENSCSAVG00000003324
N
0.729
aly
Drosophila yakuba
FBgn0068000
N
0.729
Aly
Drosophila melanogaster
FBgn0010774
N
0.729
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.729
GD19510
Drosophila simulans
FBgn0191006
N
0.729
GM10513
Drosophila sechellia
FBgn0165460
N
0.729
Aqu1.225634
Amphimedon queenslandica
Aqu1.225634
N
0.729
nasonia_NCBI_hmm488134
Nasonia vitripennis
nasonia_NCBI_hmm488134
N
0.729
ENSCING00000013568
Ciona intestinalis
ENSCING00000013568
N
0.714
GF17326
Drosophila ananassae
FBgn0094344
N
0.714
ENSMLUG00000008410
Myotis lucifugus
ENSMLUG00000008410
N
0.714
GI23076
Drosophila mojavensis
FBgn0145803
N
0.714
GH18594
Drosophila grimshawi
FBgn0126061
N
0.714
GK12741
Drosophila willistoni
FBgn0214750
N
0.714
GJ22697
Drosophila virilis
FBgn0209801
N
0.714