CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MSI1
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000015759
T38285_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000014388
RRM
1
29
GLREYFGQFGEVKECLVMRDPLTKRSXXX
ENSMEUP00000014388
RRM
77
145
IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMX
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MSI1
Pteropus vampyrus
ENSPVAG00000002225
I
0.754
MSI1
Felis catus
ENSFCAG00000011007
I
0.740
LOC100053469
Equus caballus
ENSECAG00000017526
I
0.740
Ame_R019333
Ailuropoda melanoleuca
Ame_R019333
I
0.734
MSI1
Macaca mulatta
ENSMMUG00000031527
I
0.734
MSI1
Oryctolagus cuniculus
ENSOCUG00000027716
I
0.734
MSI1
Echinops telfairi
ENSETEG00000004756
I
0.732
Msi1
Rattus norvegicus
ENSRNOG00000001156
I
0.727