CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TIAL1
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000011368
T38418_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000011903
RRM
12
56
YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGF
ENSMGAP00000011903
RRM
49
96
RVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVK
ENSMGAP00000011903
RRM
116
186
VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR
ENSMGAP00000011903
RRM
216
280
VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TIAL1
Loxodonta africana
ENSLAFG00000003412
N
1.000
Ame_R003219
Ailuropoda melanoleuca
Ame_R003219
N
1.000
TIAL1
Oryctolagus cuniculus
ENSOCUG00000003783
I
1.000
TIAL1
Taeniopygia guttata
ENSTGUG00000011148
N
1.000
TIAL1
Monodelphis domestica
ENSMODG00000008865
I
1.000
TIAL1
Sorex araneus
ENSSARG00000012980
N
0.983
TIAL1
Echinops telfairi
ENSETEG00000020276
N
0.983
TIAL1
Erinaceus europaeus
ENSEEUG00000011861
N
0.952
tial1
Xenopus tropicalis
ENSXETG00000010234
N
0.897
AAH45086
Xenopus laevis
AAH45086
N
0.865
CAC95017
Xenopus laevis
CAC95017
N
0.865
TIAL1
Otolemur garnettii
ENSOGAG00000011417
N
0.852
TIAL1
Myotis lucifugus
ENSMLUG00000004645
N
0.825
TIA1
Monodelphis domestica
ENSMODG00000011515
I
0.799
TIAL1
Takifugu rubripes
ENSTRUG00000017931
I
0.778