CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TIAL1
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000012980
T41370_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000011721
RRM
1
47
YVGNLSRDVEIEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFS
ENSSARP00000011721
RRM
38
86
RRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVK
ENSSARP00000011721
RRM
106
176
VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR
ENSSARP00000011721
RRM
214
278
VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TIAL1
Meleagris gallopavo
ENSMGAG00000011368
N
0.983
TIAL1
Loxodonta africana
ENSLAFG00000003412
N
0.983
Ame_R003219
Ailuropoda melanoleuca
Ame_R003219
N
0.983
TIAL1
Monodelphis domestica
ENSMODG00000008865
I
0.983
TIAL1
Oryctolagus cuniculus
ENSOCUG00000003783
I
0.983
TIAL1
Taeniopygia guttata
ENSTGUG00000011148
N
0.983
TIAL1
Echinops telfairi
ENSETEG00000020276
N
0.966
TIAL1
Erinaceus europaeus
ENSEEUG00000011861
N
0.940
tial1
Xenopus tropicalis
ENSXETG00000010234
N
0.889
AAH45086
Xenopus laevis
AAH45086
N
0.857
CAC95017
Xenopus laevis
CAC95017
N
0.857
TIAL1
Otolemur garnettii
ENSOGAG00000011417
N
0.837
TIAL1
Myotis lucifugus
ENSMLUG00000004645
N
0.810
TIA1
Monodelphis domestica
ENSMODG00000011515
I
0.784
TIAL1
Takifugu rubripes
ENSTRUG00000017931
I
0.764