CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF5
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000011835
T38422_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000012419
RRM
8
40
FAAVGLQEFEDPRDADDAVYELDGKELCSERVT
ENSMGAP00000012419
RRM
81
146
LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF5
Ornithorhynchus anatinus
ENSOANG00000013336
I
0.750
Q9XSS6_CANFA
Canis familiaris
ENSCAFG00000009289
N
0.737
SRSF5
Anolis carolinensis
ENSACAG00000005143
I
0.721
SRSF5
Monodelphis domestica
ENSMODG00000011362
I
0.721
SFRS5
Taeniopygia guttata
ENSTGUG00000011425
I
0.721
SFRS4
Taeniopygia guttata
ENSTGUG00000000765
N
0.717
SRSF4
Equus caballus
ENSECAG00000021350
N
0.717
SRSF4
Ornithorhynchus anatinus
ENSOANG00000015169
N
0.717
SFRS4
Gallus gallus
ENSGALG00000001411
N
0.717
SRSF4
Spermophilus tridecemlineatus
ENSSTOG00000015908
N
0.717
SRSF4
Microcebus murinus
ENSMICG00000008965
N
0.717
A6H7B7_BOVIN
Bos taurus
ENSBTAG00000011596
I
0.713
SRSF5
Canis familiaris
ENSCAFG00000016589
I
0.713
LOC100053264
Equus caballus
ENSECAG00000026873
I
0.713
SRSF5
Gorilla gorilla
ENSGGOG00000016462
I
0.713
SRSF5
Loxodonta africana
ENSLAFG00000005260
I
0.713
SRSF5
Homo sapiens
ENSG00000100650
D
0.713
SRSF5
Felis catus
ENSFCAG00000008848
I
0.713
SRSF5
Cavia porcellus
ENSCPOG00000005949
I
0.713
SRSF5
Echinops telfairi
ENSETEG00000020396
I
0.713
A6MLI3_CALJA
Callithrix jacchus
ENSCJAG00000014884
I
0.713
SRSF5
Tursiops truncatus
ENSTTRG00000003318
I
0.713
SRSF5
Otolemur garnettii
ENSOGAG00000015122
I
0.713
SRSF5
Ochotona princeps
ENSOPRG00000008286
I
0.713
SRSF5
Oryctolagus cuniculus
ENSOCUG00000009274
I
0.713
Srsf5
Mus musculus
ENSMUSG00000021134
I
0.713
SRSF5
Myotis lucifugus
ENSMLUG00000011939
I
0.713
SRSF5
Macaca mulatta
ENSMMUG00000022407
I
0.713
ENSPPYG00000005945
Pongo pygmaeus
ENSPPYG00000005945
I
0.713
SRSF5
Pan troglodytes
ENSPTRG00000006488
I
0.713
SRSF5
Vicugna pacos
ENSVPAG00000006448
I
0.713
Ame_R004936
Ailuropoda melanoleuca
Ame_R004936
I
0.713
SRSF5
Tarsius syrichta
ENSTSYG00000007786
I
0.713
SRSF5
Sus scrofa
ENSSSCG00000002312
I
0.713
Sfrs5
Rattus norvegicus
ENSRNOG00000005513
I
0.713
SRSF4
Canis familiaris
ENSCAFG00000011669
N
0.710
srsf5
Xenopus tropicalis
ENSXETG00000002211
I
0.705