SRSF5 (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000013336 T39551_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.721
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000021051 RRM 1 58
ENSOANP00000021051 RRM 100 165
ENSOANP00000021052 RRM 10 68
ENSOANP00000021052 RRM 110 175
ENSOANP00000021053 RRM 15 71
ENSOANP00000021053 RRM 155 220

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.946
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.946
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.946
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.938
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.938
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.938
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.938
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.938
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.938
SRSF5 Homo sapiens ENSG00000100650 D 0.938
SRSF5 Felis catus ENSFCAG00000008848 I 0.938
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.938
LOC100053264 Equus caballus ENSECAG00000026873 I 0.938
Srsf5 Mus musculus ENSMUSG00000021134 I 0.938
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.938
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.938
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.938
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.938
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.938
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.938
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.938
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.938
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.938
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.938
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.938
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.930
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.930
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.930
Q5ZLF9_CHICK Gallus gallus ENSGALG00000009421 I 0.922
SRSF5 Tupaia belangeri ENSTBEG00000001972 I 0.907
srsf5b Danio rerio ENSDARG00000027734 I 0.907
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.899
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.899
SRSF5 Microcebus murinus ENSMICG00000009661 I 0.845
SRSF5 Sorex araneus ENSSARG00000001059 I 0.822
SRSF5 Gasterosteus aculeatus ENSGACG00000007834 I 0.822
SRSF5 Pteropus vampyrus ENSPVAG00000009828 I 0.814
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.791
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.783
ENSACAG00000005544 Anolis carolinensis ENSACAG00000005544 I 0.775
srsf5a Danio rerio ENSDARG00000029818 I 0.767
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.767
AAH71160 Xenopus laevis AAH71160 I 0.752
Srsf5 Dipodomys ordii ENSDORG00000003989 I 0.752
XB-GENE-5954653 Xenopus tropicalis ENSXETG00000017937 I 0.752
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.752
SRSF5 Meleagris gallopavo ENSMGAG00000011835 N 0.750
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.744
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.744
AAH44085 Xenopus laevis AAH44085 I 0.744
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.744
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.729
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.729
GK13948 Drosophila willistoni FBgn0215954 I 0.721
GF17608 Drosophila ananassae FBgn0094626 I 0.721
e_gw1.89.27.1 Lottia gigantea e_gw1.89.27.1 I 0.721
B52 Drosophila melanogaster FBgn0004587 D 0.721
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.713
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.713
SRSF6 Gasterosteus aculeatus ENSGACG00000006084 I 0.713
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.713
Srsf4 Mus musculus ENSMUSG00000028911 I 0.713
SRSF4 Homo sapiens ENSG00000116350 I 0.713
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.713
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.713
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.713
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.713
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.713
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.713
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.713
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.713
GA10599-RA Drosophila pseudoobscura FBgn0070656 I 0.713
GH18528 Drosophila grimshawi FBgn0125995 I 0.713
GI22065 Drosophila mojavensis FBgn0144794 I 0.713
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.713
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.713
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.713
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.713
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.713
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.713
GL23543 Drosophila persimilis FBgn0161133 I 0.713
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.713
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.713
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.713
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.713
CpipJ_CPIJ008634 Culex pipiens CpipJ_CPIJ008634 I 0.713
CPIJ008634 Culex quinquefasciatus CPIJ008634 I 0.713
estExt_fgenesh2_pg.C_920027 Branchiostoma floridae estExt_fgenesh2_pg.C_920027 I 0.713
GJ24113 Drosophila virilis FBgn0211197 I 0.713
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.705
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.705
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.705
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.705
Srsf6 Mus musculus ENSMUSG00000016921 I 0.705
SRSF6 Pteropus vampyrus ENSPVAG00000015232 I 0.705
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.705
Sfrs6 Rattus norvegicus ENSRNOG00000006380 I 0.705
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.705
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.705
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.705
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.705
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.705
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.705
SRSF6 Homo sapiens ENSG00000124193 I 0.705
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.705