CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMGAG00000016128
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000016128
T38450_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000017066
RRM
4
66
LFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHHKLHGVCIN
ENSMGAP00000017066
RRM
80
141
LHVGNISPTCTNLELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGDAA
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A6MLC8_CALJA
Callithrix jacchus
ENSCJAG00000001294
I
0.952
XR_022144.1
Pan troglodytes
ENSPTRG00000003934
I
0.952
RBM4
Macaca mulatta
ENSMMUG00000020363
I
0.952
Rbm4
Rattus norvegicus
ENSRNOG00000019669
I
0.952
RBM4
Homo sapiens
ENSG00000173933
I
0.952
ENSDNOG00000016459
Dasypus novemcinctus
ENSDNOG00000016459
N
0.936