CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BOLL
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000012323
T39149_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000015438
RRM
35
103
IFVGGIDFKTNENDLRKFFAQYGSVKEVKIVNDRAGVSKGLVWLQLVHEDAQKILQEAEKLNYKDKKLN
ENSMODP00000015440
RRM
35
104
IFVGGIDFKTNENDLRKFFAQYGSVKEVKIVNDRAGVSKGLNVINQETSEDAQKILQEAEKLNYKDKKLN
ENSMODP00000034838
RRM
35
105
IFVGGIDFKTNENDLRKFFAQYGSVKEVKIVNDRAGVSKGLVWVTFEIVKEDAQKILQEAEKLNYKDKKLN
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BOLL
Cavia porcellus
ENSCPOG00000000390
N
0.797
BOLL
Macropus eugenii
ENSMEUG00000011305
N
0.797
BOLL
Myotis lucifugus
ENSMLUG00000004999
N
0.797
C1JGV6_BOVIN
Bos taurus
ENSBTAG00000031614
N
0.797
BOLL
Canis familiaris
ENSCAFG00000010947
N
0.797
BOLL
Otolemur garnettii
ENSOGAG00000007207
N
0.797
BOLL
Erinaceus europaeus
ENSEEUG00000003441
N
0.784
ENSPPYG00000013050
Pongo pygmaeus
ENSPPYG00000013050
N
0.784
BOLL
Echinops telfairi
ENSETEG00000013582
N
0.784
BOLL
Homo sapiens
ENSG00000152430
N
0.784
BOLL
Microcebus murinus
ENSMICG00000011845
N
0.784
BOLL
Loxodonta africana
ENSLAFG00000010956
N
0.784
BOLL
Gorilla gorilla
ENSGGOG00000013594
N
0.784
Boll
Mus musculus
ENSMUSG00000025977
N
0.784
BOLL
Oryctolagus cuniculus
ENSOCUG00000013979
N
0.784
BOLL
Macaca mulatta
ENSMMUG00000023811
N
0.784
Ame_R008142
Ailuropoda melanoleuca
Ame_R008142
N
0.784
BOLL
Pan troglodytes
ENSPTRG00000012777
N
0.784
Boll
Rattus norvegicus
ENSRNOG00000015798
N
0.784
BOLL
Ochotona princeps
ENSOPRG00000013693
N
0.784
ENSMGAG00000007162
Meleagris gallopavo
ENSMGAG00000007162
N
0.770
BOLL
Gallus gallus
ENSGALG00000008116
N
0.770
BOLL
Anolis carolinensis
ENSACAG00000009285
N
0.770
Q6EVI8_CALJA
Callithrix jacchus
ENSCJAG00000004092
N
0.770
ox_plat1_152522.152522
Ornithorhynchus anatinus
ENSOANG00000019928
N
0.730
Boll
Dipodomys ordii
ENSDORG00000010791
N
0.712
BOLL
Spermophilus tridecemlineatus
ENSSTOG00000003536
N
0.712