CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
BOLL
(
Gallus gallus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGALG00000008116
T37669_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000013159
RRM
41
110
IFVGGIDFKTNENDLRKFFAQYGCVREVKIVNDRAGISKGYGFITFETQEDAQKILQEAKKLNYKDKKLN
Links
Other
RRM
family RBPs
Other
Gallus gallus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMGAG00000007162
Meleagris gallopavo
ENSMGAG00000007162
N
1.000
BOLL
Anolis carolinensis
ENSACAG00000009285
N
0.943
BOLL
Macropus eugenii
ENSMEUG00000011305
N
0.943
Ame_R008142
Ailuropoda melanoleuca
Ame_R008142
N
0.929
BOLL
Ochotona princeps
ENSOPRG00000013693
N
0.929
Boll
Mus musculus
ENSMUSG00000025977
N
0.929
BOLL
Echinops telfairi
ENSETEG00000013582
N
0.929
Boll
Rattus norvegicus
ENSRNOG00000015798
N
0.929
BOLL
Loxodonta africana
ENSLAFG00000010956
N
0.929
BOLL
Microcebus murinus
ENSMICG00000011845
N
0.929
BOLL
Cavia porcellus
ENSCPOG00000000390
N
0.914
Q6EVI8_CALJA
Callithrix jacchus
ENSCJAG00000004092
N
0.914
C1JGV6_BOVIN
Bos taurus
ENSBTAG00000031614
N
0.914
BOLL
Myotis lucifugus
ENSMLUG00000004999
N
0.914
BOLL
Canis familiaris
ENSCAFG00000010947
N
0.914
BOLL
Otolemur garnettii
ENSOGAG00000007207
N
0.914
BOLL
Erinaceus europaeus
ENSEEUG00000003441
N
0.900
BOLL
Gorilla gorilla
ENSGGOG00000013594
N
0.900
BOLL
Oryctolagus cuniculus
ENSOCUG00000013979
N
0.900
BOLL
Macaca mulatta
ENSMMUG00000023811
N
0.900
ENSPPYG00000013050
Pongo pygmaeus
ENSPPYG00000013050
N
0.900
BOLL
Homo sapiens
ENSG00000152430
N
0.900
BOLL
Pan troglodytes
ENSPTRG00000012777
N
0.900
ox_plat1_152522.152522
Ornithorhynchus anatinus
ENSOANG00000019928
N
0.857
BOLL
Taeniopygia guttata
ENSTGUG00000010496
N
0.800
BOLL
Choloepus hoffmanni
ENSCHOG00000012634
N
0.786
BOLL
Sus scrofa
ENSSSCG00000016082
N
0.786
BOLL
Tupaia belangeri
ENSTBEG00000017343
N
0.786
BOLL
Monodelphis domestica
ENSMODG00000012323
N
0.770
Boll
Dipodomys ordii
ENSDORG00000010791
N
0.757
BOLL
Spermophilus tridecemlineatus
ENSSTOG00000003536
N
0.757