CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BOLL
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000011305
T38242_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000010315
RRM
40
109
IFVGGIDFKTNENDLRKFFAQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLN
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BOLL
Ochotona princeps
ENSOPRG00000013693
N
0.986
BOLL
Echinops telfairi
ENSETEG00000013582
N
0.986
Ame_R008142
Ailuropoda melanoleuca
Ame_R008142
N
0.986
Boll
Mus musculus
ENSMUSG00000025977
N
0.986
Boll
Rattus norvegicus
ENSRNOG00000015798
N
0.986
BOLL
Microcebus murinus
ENSMICG00000011845
N
0.986
BOLL
Loxodonta africana
ENSLAFG00000010956
N
0.986
BOLL
Cavia porcellus
ENSCPOG00000000390
N
0.971
BOLL
Anolis carolinensis
ENSACAG00000009285
N
0.971
BOLL
Canis familiaris
ENSCAFG00000010947
N
0.971
C1JGV6_BOVIN
Bos taurus
ENSBTAG00000031614
N
0.971
Q6EVI8_CALJA
Callithrix jacchus
ENSCJAG00000004092
N
0.971
BOLL
Myotis lucifugus
ENSMLUG00000004999
N
0.971
BOLL
Otolemur garnettii
ENSOGAG00000007207
N
0.971
BOLL
Oryctolagus cuniculus
ENSOCUG00000013979
N
0.957
BOLL
Erinaceus europaeus
ENSEEUG00000003441
N
0.957
BOLL
Macaca mulatta
ENSMMUG00000023811
N
0.957
ENSPPYG00000013050
Pongo pygmaeus
ENSPPYG00000013050
N
0.957
BOLL
Gorilla gorilla
ENSGGOG00000013594
N
0.957
BOLL
Pan troglodytes
ENSPTRG00000012777
N
0.957
BOLL
Homo sapiens
ENSG00000152430
N
0.957
ENSMGAG00000007162
Meleagris gallopavo
ENSMGAG00000007162
N
0.943
BOLL
Gallus gallus
ENSGALG00000008116
N
0.943
ox_plat1_152522.152522
Ornithorhynchus anatinus
ENSOANG00000019928
N
0.900
BOLL
Sus scrofa
ENSSSCG00000016082
N
0.843
BOLL
Choloepus hoffmanni
ENSCHOG00000012634
N
0.843
BOLL
Tupaia belangeri
ENSTBEG00000017343
N
0.829
BOLL
Taeniopygia guttata
ENSTGUG00000010496
N
0.814
Boll
Dipodomys ordii
ENSDORG00000010791
N
0.800
BOLL
Spermophilus tridecemlineatus
ENSSTOG00000003536
N
0.800
BOLL
Monodelphis domestica
ENSMODG00000012323
N
0.797