CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOANG00000006742
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000006742
T39486_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000010758
RRM
64
131
IFVGGIDVRMDETELRGFFTRYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIIESQVNFHGKKLK
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCJAG00000003593
Callithrix jacchus
ENSCJAG00000003593
N
0.779
ENSVPAG00000000468
Vicugna pacos
ENSVPAG00000000468
N
0.753
LOC100063430
Equus caballus
ENSECAG00000010923
N
0.753
Dazl
Dipodomys ordii
ENSDORG00000011497
N
0.753
Ame_R003159
Ailuropoda melanoleuca
Ame_R003159
N
0.740
ENSOCUG00000012635
Oryctolagus cuniculus
ENSOCUG00000012635
N
0.740
ENSCAFG00000005867
Canis familiaris
ENSCAFG00000005867
N
0.740
Dazl
Mus musculus
ENSMUSG00000010592
N
0.740
XM_001380213.1
Monodelphis domestica
ENSMODG00000014730
N
0.740
A3DUJ0_BOVIN
Bos taurus
ENSBTAG00000000502
N
0.740
ENSTSYG00000000788
Tarsius syrichta
ENSTSYG00000000788
N
0.740
Dazl
Rattus norvegicus
ENSRNOG00000023474
N
0.740
ENSOGAG00000006983
Otolemur garnettii
ENSOGAG00000006983
N
0.740
ENSTBEG00000012225
Tupaia belangeri
ENSTBEG00000012225
N
0.740
ENSSARG00000008473
Sorex araneus
ENSSARG00000008473
N
0.740
DAZL
Loxodonta africana
ENSLAFG00000009132
N
0.726
DAZL
Procavia capensis
ENSPCAG00000016182
N
0.726
DAZL
Gorilla gorilla
ENSGGOG00000023632
N
0.726
O77586_MACMU
Macaca mulatta
ENSMMUG00000011361
N
0.726
ENSPPYG00000014080
Pongo pygmaeus
ENSPPYG00000014080
N
0.726
DAZL
Pteropus vampyrus
ENSPVAG00000007836
N
0.726
ENSCPOG00000007628
Cavia porcellus
ENSCPOG00000007628
N
0.726
O77584_PANTR
Pan troglodytes
ENSPTRG00000014674
N
0.726
ENSEEUG00000005973
Erinaceus europaeus
ENSEEUG00000005973
N
0.726
DAZL
Homo sapiens
ENSG00000092345
N
0.726