CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DAZL
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000023632
T37916_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000019211
RRM
42
109
VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLK
ENSGGOP00000024482
RRM
42
109
VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLK
ENSGGOP00000027225
RRM
62
129
VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLK
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000014080
Pongo pygmaeus
ENSPPYG00000014080
N
1.000
O77584_PANTR
Pan troglodytes
ENSPTRG00000014674
N
1.000
O77586_MACMU
Macaca mulatta
ENSMMUG00000011361
N
1.000
DAZL
Homo sapiens
ENSG00000092345
N
1.000
Ame_R003159
Ailuropoda melanoleuca
Ame_R003159
N
0.985
A3DUJ0_BOVIN
Bos taurus
ENSBTAG00000000502
N
0.985
ENSCAFG00000005867
Canis familiaris
ENSCAFG00000005867
N
0.985
ENSTBEG00000012225
Tupaia belangeri
ENSTBEG00000012225
N
0.985
ENSOCUG00000012635
Oryctolagus cuniculus
ENSOCUG00000012635
N
0.985
ENSEEUG00000005973
Erinaceus europaeus
ENSEEUG00000005973
N
0.985
ENSSARG00000008473
Sorex araneus
ENSSARG00000008473
N
0.985
ENSOGAG00000006983
Otolemur garnettii
ENSOGAG00000006983
N
0.985
XM_001380213.1
Monodelphis domestica
ENSMODG00000014730
N
0.985
Dazl
Mus musculus
ENSMUSG00000010592
N
0.985
Dazl
Rattus norvegicus
ENSRNOG00000023474
N
0.985
DAZL
Pteropus vampyrus
ENSPVAG00000007836
N
0.971
Dazl
Dipodomys ordii
ENSDORG00000011497
N
0.971
DAZL
Loxodonta africana
ENSLAFG00000009132
N
0.971
LOC100063430
Equus caballus
ENSECAG00000010923
N
0.971
ENSVPAG00000000468
Vicugna pacos
ENSVPAG00000000468
N
0.971
ENSTSYG00000000788
Tarsius syrichta
ENSTSYG00000000788
N
0.956
DAZL
Procavia capensis
ENSPCAG00000016182
N
0.956
ENSCPOG00000007628
Cavia porcellus
ENSCPOG00000007628
N
0.941
DAZ3
Homo sapiens
ENSG00000187191
N
0.882
DAZ1
Homo sapiens
ENSG00000188120
N
0.882
DAZ2
Homo sapiens
ENSG00000205944
N
0.882
DAZ4
Homo sapiens
ENSG00000205916
N
0.882
DAZL
Choloepus hoffmanni
ENSCHOG00000005264
N
0.868
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000022519
N
0.868
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000022523
N
0.868
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000023120
N
0.868
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000033761
N
0.868
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000028811
N
0.868
ENSMEUG00000007283
Macropus eugenii
ENSMEUG00000007283
N
0.838
ENSMGAG00000010878
Meleagris gallopavo
ENSMGAG00000010878
N
0.809
DAZL_CHICK
Gallus gallus
ENSGALG00000011243
N
0.809
AAI70361
Xenopus laevis
AAI70361
N
0.809
AAC41242
Xenopus laevis
AAC41242
N
0.809
O57437
Xenopus laevis
O57437
N
0.809
AAI70359
Xenopus laevis
AAI70359
N
0.809
ENSCJAG00000003593
Callithrix jacchus
ENSCJAG00000003593
N
0.800
DAZL
Taeniopygia guttata
ENSTGUG00000003145
N
0.794
AAH71023
Xenopus laevis
AAH71023
N
0.794
AAH97658
Xenopus laevis
AAH97658
N
0.794
Q4V7Y4
Xenopus laevis
Q4V7Y4
N
0.794
dazl
Xenopus tropicalis
ENSXETG00000025199
N
0.765
ENSOANG00000006742
Ornithorhynchus anatinus
ENSOANG00000006742
N
0.726