CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CSTF2
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000011192
T39875_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000010023
RRM
43
88
XXXXLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CSTF2
Ochotona princeps
ENSOPRG00000003106
N
1.000
CSTF2
Spermophilus tridecemlineatus
ENSSTOG00000001797
N
1.000
ENSMGAG00000004139
Meleagris gallopavo
ENSMGAG00000004139
N
0.913
LOC100062520
Equus caballus
ENSECAG00000004701
N
0.824
Cstf2
Mus musculus
ENSMUSG00000031256
N
0.824
ENSMEUG00000014025
Macropus eugenii
ENSMEUG00000014025
N
0.804
ENSCING00000003248
Ciona intestinalis
ENSCING00000003248
N
0.723
cassava22174.valid.m1
Manihot esculenta
cassava22174.valid.m1
N
0.717