SPEN (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000020159 T40269_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000025014 RRM 44 114
ENSORLP00000025014 RRM 147 214
ENSORLP00000025014 RRM 226 290

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Procavia capensis ENSPCAG00000009543 N 0.887
SPEN Bos taurus ENSBTAG00000018729 N 0.843
spen Danio rerio ENSDARG00000074245 N 0.828
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.804
SPEN Taeniopygia guttata ENSTGUG00000002064 N 0.799
SPEN Homo sapiens ENSG00000065526 N 0.710