SPEN (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000004165 T39458_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000006610 RRM 1 48
ENSOANP00000006610 RRM 312 382
ENSOANP00000006610 RRM 415 482
ENSOANP00000006610 RRM 494 522
ENSOANP00000006611 RRM 50 120
ENSOANP00000006611 RRM 153 220
ENSOANP00000006611 RRM 232 270

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Taeniopygia guttata ENSTGUG00000002064 N 0.994
SPEN Macropus eugenii ENSMEUG00000002422 N 0.941
spen Danio rerio ENSDARG00000074245 N 0.933
SPEN Homo sapiens ENSG00000065526 N 0.856
SPEN Procavia capensis ENSPCAG00000009543 N 0.843
SPEN Anolis carolinensis ENSACAG00000013761 N 0.833
SPEN Ochotona princeps ENSOPRG00000015800 N 0.825
LOC100053790 Equus caballus ENSECAG00000008833 N 0.823
SPEN Loxodonta africana ENSLAFG00000004524 N 0.823
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.823
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.821
SPEN Monodelphis domestica ENSMODG00000003411 N 0.814
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.813
SPEN Oryzias latipes ENSORLG00000020159 N 0.804
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.798
SPEN Bos taurus ENSBTAG00000018729 N 0.794
SPEN Cavia porcellus ENSCPOG00000014036 N 0.786
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.783
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.783
SPEN Gallus gallus ENSGALG00000003662 N 0.783
SPEN Canis familiaris ENSCAFG00000016132 N 0.776
Spen Mus musculus ENSMUSG00000040761 N 0.772
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.772
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.772
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.772
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.770
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.768
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.768
SPEN Macaca mulatta ENSMMUG00000008026 N 0.765
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.751
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.735
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.732
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.728
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.713
SPEN Oryzias latipes ENSORLG00000018414 N 0.713
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.710
SPEN Danio rerio ENSDARG00000074332 N 0.702
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.702