CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CELF6
(
Procavia capensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPCAG00000001078
T40284_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000001025
RRM
48
117
LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMN
ENSPCAP00000001025
RRM
136
165
LFVGMLGKQQAEEDVRRLFQPVGHIXXXXX
ENSPCAP00000001025
RRM
396
451
LFIYHLPQEFGDAELVQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTA
Links
Other
RRM
family RBPs
Other
Procavia capensis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF6
Oryctolagus cuniculus
ENSOCUG00000021663
I
0.781
Celf6
Dipodomys ordii
ENSDORG00000004882
I
0.712