CELF6 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000021663 T39745_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.857
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000020486 RRM 9 78
ENSOCUP00000020486 RRM 97 138
ENSOCUP00000020486 RRM 369 439

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.887
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.865
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.857
CELF6 Bos taurus ENSBTAG00000014092 I 0.857
CELF6 Sus scrofa ENSSSCG00000001928 I 0.857
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.857
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.857
HEXA Macaca mulatta ENSMMUG00000010687 I 0.857
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.857
BRUNOL6 Homo sapiens ENSG00000140488 D 0.857
CELF6 Felis catus ENSFCAG00000016249 I 0.857
Celf6 Mus musculus ENSMUSG00000032297 I 0.857
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.848
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.843
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.840
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.795
CELF6 Procavia capensis ENSPCAG00000001078 N 0.781
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.757
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.757
Celf4 Mus musculus ENSMUSG00000024268 I 0.752
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.752
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.748
BRUNOL5 Homo sapiens ENSG00000161082 D 0.743
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.738
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.738
CELF4 Oryzias latipes ENSORLG00000008913 I 0.733
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.733
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.733
Celf3 Mus musculus ENSMUSG00000028137 I 0.733
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.733
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.733
CELF3 Homo sapiens ENSG00000159409 I 0.733
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.733
CELF3 Equus caballus ENSECAG00000020365 I 0.733
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.733
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.733
CELF3 Canis familiaris ENSCAFG00000012794 I 0.733
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.733
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.733
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.733
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.729
AAA81375 Xenopus laevis AAA81375 I 0.729
AAH57704 Xenopus laevis AAH57704 I 0.729
AAH72134 Xenopus laevis AAH72134 I 0.729
Q91579 Xenopus laevis Q91579 I 0.729
CELF5 Oryzias latipes ENSORLG00000004600 I 0.724
celf5 Danio rerio ENSDARG00000071375 I 0.724
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.719
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.719
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.719
AAH46942 Xenopus laevis AAH46942 I 0.719
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.719
ACH69785 Xenopus laevis ACH69785 I 0.719
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.718
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.718
CELF3 Sus scrofa ENSSSCG00000006618 I 0.714
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.714
celf3 Danio rerio ENSDARG00000034668 I 0.710
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.710
CELF3 Procavia capensis ENSPCAG00000001623 I 0.705