CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
EIF4B
(
Procavia capensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPCAG00000001759
T40288_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000001655
RRM
98
163
AFLGNLPYDVTEDSIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEEXXXX
Links
Other
RRM
family RBPs
Other
Procavia capensis
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EIF4B
Felis catus
ENSFCAG00000000300
N
1.000
EIF4B
Myotis lucifugus
ENSMLUG00000013021
N
0.970
EIF4B
Equus caballus
ENSECAG00000024091
I
0.886
EIF4B
Canis familiaris
ENSCAFG00000007117
I
0.886
EIF4B
Tupaia belangeri
ENSTBEG00000005423
I
0.886
Q3MHP6_BOVIN
Bos taurus
ENSBTAG00000006883
I
0.886
ENSLAFG00000009534
Loxodonta africana
ENSLAFG00000009534
I
0.886
EIF4B
Oryctolagus cuniculus
ENSOCUG00000013484
I
0.886
EIF4B
Ochotona princeps
ENSOPRG00000008447
I
0.886
EIF4B
Spermophilus tridecemlineatus
ENSSTOG00000006800
I
0.886
EIF4B
Choloepus hoffmanni
ENSCHOG00000001608
I
0.871
ENSPPYG00000025848
Pongo pygmaeus
ENSPPYG00000025848
I
0.871
XR_020585.1
Pan troglodytes
ENSPTRG00000004997
I
0.871
EIF4B
Callithrix jacchus
ENSCJAG00000018176
I
0.871
Ame_R011610
Ailuropoda melanoleuca
Ame_R011610
I
0.871
EIF4B
Tarsius syrichta
ENSTSYG00000012880
I
0.871
EIF4B
Vicugna pacos
ENSVPAG00000007999
I
0.871
ENSGGOG00000013695
Gorilla gorilla
ENSGGOG00000013695
I
0.871
EIF4B
Homo sapiens
ENSG00000063046
D
0.871
ENSMMUG00000001062
Macaca mulatta
ENSMMUG00000001062
I
0.871
Eif4b
Mus musculus
ENSMUSG00000058655
I
0.857
ENSCPOG00000005595
Cavia porcellus
ENSCPOG00000005595
I
0.857
EIF4B
Tursiops truncatus
ENSTTRG00000002770
I
0.857
Eif4b
Rattus norvegicus
ENSRNOG00000010103
I
0.857
EIF4B
Pteropus vampyrus
ENSPVAG00000009362
I
0.857
EIF4B
Sorex araneus
ENSSARG00000000838
I
0.843
EIF4B
Ornithorhynchus anatinus
ENSOANG00000009940
I
0.843
ENSGGOG00000004382
Gorilla gorilla
ENSGGOG00000004382
I
0.829
ENSCPOG00000021782
Cavia porcellus
ENSCPOG00000021782
I
0.829
EIF4B
Anolis carolinensis
ENSACAG00000011869
I
0.829
ENSMMUG00000008391
Macaca mulatta
ENSMMUG00000008391
N
0.814
EIF4B
Meleagris gallopavo
ENSMGAG00000005127
I
0.814
EIF4B
Gasterosteus aculeatus
ENSGACG00000008010
I
0.814
eif4b
Xenopus tropicalis
ENSXETG00000001829
I
0.814
EIF4B
Taeniopygia guttata
ENSTGUG00000003829
I
0.800
eif4ba
Danio rerio
ENSDARG00000017439
I
0.800
EIF4B
Tetraodon nigroviridis
ENSTNIG00000007192
I
0.771
eif4bb
Danio rerio
ENSDARG00000010194
I
0.743
EIF4B
Oryzias latipes
ENSORLG00000016502
I
0.729