CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM45
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000001516
T41269_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000001386
RRM
33
79
VISKYTPESVLRERFSPFGEIQDFWVVRTRTRKSKGIAFVKFAASSQ
ENSSARP00000001386
RRM
115
146
RDVEDEELTRIFVMIPKSYTEEDLREKFKXXX
ENSSARP00000001386
RRM
257
317
PFTEEQLFSIFDIVPGLEYCEVQRDPYSNYGHGVVQYFNVASAIYAKYKLHGFQYPPGNRI
ENSSARP00000001386
RRM
399
458
NPHPLPLDVLEDIFCRFGNLIEVYLVSGKNVGYAKYADRLSANDAISTLHGKILNGVRLK
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM45
Tursiops truncatus
ENSTTRG00000007653
I
0.885
RBM45
Equus caballus
ENSECAG00000017129
I
0.734
RBM45
Sus scrofa
ENSSSCG00000015996
I
0.727
Ame_R006889
Ailuropoda melanoleuca
Ame_R006889
I
0.727
Q3MHF0_BOVIN
Bos taurus
ENSBTAG00000006168
I
0.726
RBM45
Oryctolagus cuniculus
ENSOCUG00000001125
I
0.724
RBM45
Pteropus vampyrus
ENSPVAG00000010390
I
0.724
RBM45
Tarsius syrichta
ENSTSYG00000007757
I
0.724
RBM45
Myotis lucifugus
ENSMLUG00000005782
I
0.724
RBM45
Pan troglodytes
ENSPTRG00000012686
I
0.720
RBM45
Macaca mulatta
ENSMMUG00000002013
I
0.720
ENSPPYG00000012974
Pongo pygmaeus
ENSPPYG00000012974
I
0.720
RBM45
Homo sapiens
ENSG00000155636
I
0.720
LOC100394606
Callithrix jacchus
ENSCJAG00000021516
I
0.720
RBM45
Gorilla gorilla
ENSGGOG00000013981
I
0.720
RBM45
Canis familiaris
ENSCAFG00000013640
I
0.714
RBM45
Monodelphis domestica
ENSMODG00000009742
I
0.709
RBM45
Cavia porcellus
ENSCPOG00000000684
I
0.706