CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSSSCG00000012929
(
Sus scrofa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSSCG00000012929
T41496_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000013748
RRM
3
66
IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELRPGRAL
ENSSSCP00000013748
RRM
81
118
IFVGNVSAACTSQELRSLFERRGRVIECDVVKGNAEAG
Links
Other
RRM
family RBPs
Other
Sus scrofa
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM14
Pan troglodytes
ENSPTRG00000003932
N
0.961
RBM4
Homo sapiens
ENSG00000239306
D
0.961
RBM14
Sorex araneus
ENSSARG00000006530
N
0.951
RBM14
Spermophilus tridecemlineatus
ENSSTOG00000009796
N
0.931
RBM14
Dasypus novemcinctus
ENSDNOG00000010103
N
0.896
RBM14
Ornithorhynchus anatinus
ENSOANG00000001240
N
0.843
Rbm4
Rattus norvegicus
ENSRNOG00000019669
I
0.784
RBM14
Oryctolagus cuniculus
ENSOCUG00000022838
N
0.764
RBM14
Procavia capensis
ENSPCAG00000003334
N
0.764
RBM14
Pteropus vampyrus
ENSPVAG00000010483
N
0.764
ENSPPYG00000003015
Pongo pygmaeus
ENSPPYG00000003015
N
0.764
RBM14
Macaca mulatta
ENSMMUG00000007830
N
0.764
RBM14
Ochotona princeps
ENSOPRG00000009139
N
0.764
RBM14
Microcebus murinus
ENSMICG00000003814
N
0.764
RBM14
Myotis lucifugus
ENSMLUG00000015545
N
0.764
RBM14
Canis familiaris
ENSCAFG00000012405
N
0.764
RBM14
Tursiops truncatus
ENSTTRG00000011156
N
0.764
RBM14
Cavia porcellus
ENSCPOG00000008019
N
0.764
A6MLC8_CALJA
Callithrix jacchus
ENSCJAG00000001294
I
0.764
Rbm14
Dipodomys ordii
ENSDORG00000002474
N
0.764
RBM14
Gorilla gorilla
ENSGGOG00000009469
N
0.764
Rbm14
Mus musculus
ENSMUSG00000006456
N
0.756
RBM14_BOVIN
Bos taurus
ENSBTAG00000001225
N
0.756
Ame_R016451
Ailuropoda melanoleuca
Ame_R016451
N
0.756
RBM14
Tupaia belangeri
ENSTBEG00000003641
N
0.717