CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
HNRNPH1
(
Spermophilus tridecemlineatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSTOG00000016376
T41675_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000014665
RRM
28
82
FFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVE
ENSSTOP00000014665
RRM
111
133
VRLRGLPFGCSKEEIVQFFSXXX
ENSSTOP00000014665
RRM
289
356
VHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVE
Links
Other
RRM
family RBPs
Other
Spermophilus tridecemlineatus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPH1
Sorex araneus
ENSSARG00000003024
I
0.708
HNRNPH1
Tursiops truncatus
ENSTTRG00000000470
I
0.708
LOC100067495
Equus caballus
ENSECAG00000014429
I
0.705
ENSCHOG00000003841
Choloepus hoffmanni
ENSCHOG00000003841
I
0.705
HNRNPH1
Tarsius syrichta
ENSTSYG00000006417
I
0.705
HNRNPH2
Felis catus
ENSFCAG00000015400
I
0.702