CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BOLL
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000017343
T41825_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000015084
RRM
40
102
IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAGXXX
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Boll
Dipodomys ordii
ENSDORG00000010791
N
0.937
BOLL
Spermophilus tridecemlineatus
ENSSTOG00000003536
N
0.937
BOLL
Microcebus murinus
ENSMICG00000011845
N
0.843
Ame_R008142
Ailuropoda melanoleuca
Ame_R008142
N
0.843
BOLL
Echinops telfairi
ENSETEG00000013582
N
0.843
Boll
Mus musculus
ENSMUSG00000025977
N
0.843
Boll
Rattus norvegicus
ENSRNOG00000015798
N
0.843
BOLL
Loxodonta africana
ENSLAFG00000010956
N
0.843
BOLL
Ochotona princeps
ENSOPRG00000013693
N
0.843
BOLL
Otolemur garnettii
ENSOGAG00000007207
N
0.829
BOLL
Myotis lucifugus
ENSMLUG00000004999
N
0.829
BOLL
Macropus eugenii
ENSMEUG00000011305
N
0.829
C1JGV6_BOVIN
Bos taurus
ENSBTAG00000031614
N
0.829
Q6EVI8_CALJA
Callithrix jacchus
ENSCJAG00000004092
N
0.829
BOLL
Anolis carolinensis
ENSACAG00000009285
N
0.829
BOLL
Cavia porcellus
ENSCPOG00000000390
N
0.829
BOLL
Erinaceus europaeus
ENSEEUG00000003441
N
0.829
BOLL
Canis familiaris
ENSCAFG00000010947
N
0.829
BOLL
Pan troglodytes
ENSPTRG00000012777
N
0.814
ENSPPYG00000013050
Pongo pygmaeus
ENSPPYG00000013050
N
0.814
BOLL
Oryctolagus cuniculus
ENSOCUG00000013979
N
0.814
BOLL
Macaca mulatta
ENSMMUG00000023811
N
0.814
BOLL
Homo sapiens
ENSG00000152430
N
0.814
BOLL
Gorilla gorilla
ENSGGOG00000013594
N
0.814
BOLL
Gallus gallus
ENSGALG00000008116
N
0.786
ENSMGAG00000007162
Meleagris gallopavo
ENSMGAG00000007162
N
0.786
ox_plat1_152522.152522
Ornithorhynchus anatinus
ENSOANG00000019928
N
0.729
BOLL
Choloepus hoffmanni
ENSCHOG00000012634
N
0.700
BOLL
Sus scrofa
ENSSSCG00000016082
N
0.700