RBM45 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000009116 T41935_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbm45
M209_0.6 		Mus musculus GACGAMV RNAcompete
Ray et al.(2013)
RNCMPT00241 		0.717
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000009412 RRM 44 109
ENSTGUP00000009412 RRM 135 198
ENSTGUP00000009412 RRM 264 324
ENSTGUP00000009412 RRM 411 469

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q5ZK78_CHICK Gallus gallus ENSGALG00000009202 I 0.896
Q3MHF0_BOVIN Bos taurus ENSBTAG00000006168 I 0.738
RBM45 Pteropus vampyrus ENSPVAG00000010390 I 0.737
RBM45 Cavia porcellus ENSCPOG00000000684 I 0.737
RBM45 Myotis lucifugus ENSMLUG00000005782 I 0.737
Ame_R006889 Ailuropoda melanoleuca Ame_R006889 I 0.736
RBM45 Sus scrofa ENSSSCG00000015996 I 0.736
RBM45 Homo sapiens ENSG00000155636 I 0.733
RBM45 Pan troglodytes ENSPTRG00000012686 I 0.733
LOC100394606 Callithrix jacchus ENSCJAG00000021516 I 0.733
RBM45 Macaca mulatta ENSMMUG00000002013 I 0.733
RBM45 Gorilla gorilla ENSGGOG00000013981 I 0.733
ENSPPYG00000012974 Pongo pygmaeus ENSPPYG00000012974 I 0.733
RBM45 Canis familiaris ENSCAFG00000013640 I 0.730
RBM45 Monodelphis domestica ENSMODG00000009742 I 0.730
RBM45 Oryctolagus cuniculus ENSOCUG00000001125 I 0.729
RBM45 Tarsius syrichta ENSTSYG00000007757 I 0.729
Rbm45 Mus musculus ENSMUSG00000042369 D 0.717
Rbm45 Rattus norvegicus ENSRNOG00000010595 I 0.714