CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSTGUG00000014863
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000014863
T41980_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000015214
RRM
1
35
MKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMH
ENSTGUP00000015214
RRM
108
174
LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENENQAGAARDALQGFKITPSHAMK
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSTGUG00000016665
Taeniopygia guttata
ENSTGUG00000016665
N
0.951
ENSTGUG00000016203
Taeniopygia guttata
ENSTGUG00000016203
I
0.806
GD24751
Drosophila simulans
FBgn0196072
I
0.804
SNRPB2
Macropus eugenii
ENSMEUG00000016552
I
0.798
SNRPB2
Taeniopygia guttata
ENSTGUG00000002415
I
0.727
SNRPB2
Gallus gallus
ENSGALG00000008729
I
0.719
SNRPB2
Meleagris gallopavo
ENSMGAG00000006135
I
0.719
SNRPB2
Ochotona princeps
ENSOPRG00000011587
I
0.712
Snrpb2
Mus musculus
ENSMUSG00000008333
I
0.712
SNRPB2
Otolemur garnettii
ENSOGAG00000015146
I
0.712
SNRPB2
Oryctolagus cuniculus
ENSOCUG00000001427
I
0.712
SNRPB2
Procavia capensis
ENSPCAG00000003156
I
0.712
SNRPB2
Ornithorhynchus anatinus
ENSOANG00000001237
I
0.712
ENSPPYG00000010723
Pongo pygmaeus
ENSPPYG00000010723
I
0.712
SNRPB2
Spermophilus tridecemlineatus
ENSSTOG00000009198
I
0.712
SNRPB2
Tupaia belangeri
ENSTBEG00000012892
I
0.712
SNRPB2
Sus scrofa
ENSSSCG00000007081
I
0.712
SNRPB2
Sorex araneus
ENSSARG00000002681
I
0.712
SNRPB2
Pan troglodytes
ENSPTRG00000013271
I
0.712
Snrpb2
Rattus norvegicus
ENSRNOG00000004967
I
0.712
SNRPB2
Macaca mulatta
ENSMMUG00000014493
I
0.712
SNRPB2
Microcebus murinus
ENSMICG00000015404
I
0.712
LOC477148
Canis familiaris
ENSCAFG00000005520
I
0.712
LOC100408625
Callithrix jacchus
ENSCJAG00000004811
I
0.712
Q3T0M6_BOVIN
Bos taurus
ENSBTAG00000027506
I
0.712
Ame_R017767
Ailuropoda melanoleuca
Ame_R017767
I
0.712
SNRPB2
Tursiops truncatus
ENSTTRG00000006395
I
0.712
SNRPB2
Cavia porcellus
ENSCPOG00000005014
I
0.712
LOC100050830
Equus caballus
ENSECAG00000018407
I
0.712
SNRPB2
Vicugna pacos
ENSVPAG00000004557
I
0.712
SNRPB2
Tarsius syrichta
ENSTSYG00000008857
I
0.712
SNRPB2
Loxodonta africana
ENSLAFG00000008775
I
0.712
SNRPB2
Homo sapiens
ENSG00000125870
I
0.712
SNRPB2
Gorilla gorilla
ENSGGOG00000003937
I
0.712
SNRPB2
Anolis carolinensis
ENSACAG00000000582
I
0.705
SNRPB2
Myotis lucifugus
ENSMLUG00000008163
I
0.705