HTATSF1 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000013383 T42336_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000034103 RRM 146 223
ENSTRUP00000034103 RRM 297 353
ENSTRUP00000034104 RRM 126 203
ENSTRUP00000034104 RRM 277 333

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HTATSF1 Tetraodon nigroviridis ENSTNIG00000016140 N 0.963
HTATSF1 Gasterosteus aculeatus ENSGACG00000020459 N 0.883
HTATSF1 Oryzias latipes ENSORLG00000002356 N 0.837
htatsf1 Danio rerio ENSDARG00000056649 N 0.807
HTATSF1 Ornithorhynchus anatinus ENSOANG00000011674 N 0.793
HTATSF1 Macropus eugenii ENSMEUG00000004133 N 0.785
HTATSF1 Taeniopygia guttata ENSTGUG00000002099 N 0.778
XM_001362552.1 Monodelphis domestica ENSMODG00000014087 N 0.778
HTATSF1 Meleagris gallopavo ENSMGAG00000003558 N 0.770
Q5ZKD3_CHICK Gallus gallus ENSGALG00000006410 N 0.770
HTATSF1 Anolis carolinensis ENSACAG00000009346 N 0.770
htatsf1 Xenopus tropicalis ENSXETG00000019749 N 0.763
HTATSF1 Dasypus novemcinctus ENSDNOG00000002254 N 0.756
Htatsf1 Rattus norvegicus ENSRNOG00000027761 N 0.756
Htatsf1 Mus musculus ENSMUSG00000067873 N 0.756
HTATSF1 Myotis lucifugus ENSMLUG00000009234 N 0.756
Htatsf1 Dipodomys ordii ENSDORG00000006140 N 0.756
HTATSF1 Oryctolagus cuniculus ENSOCUG00000012570 N 0.748
HTATSF1 Pteropus vampyrus ENSPVAG00000010281 N 0.748
HTATSF1 Sorex araneus ENSSARG00000005193 N 0.748
HTATSF1 Loxodonta africana ENSLAFG00000014307 N 0.748
Ame_R008048 Ailuropoda melanoleuca Ame_R008048 N 0.741
ENSPPYG00000020765 Pongo pygmaeus ENSPPYG00000020765 N 0.741
HTATSF1 Tursiops truncatus ENSTTRG00000002269 N 0.741
LOC100054669 Equus caballus ENSECAG00000009156 N 0.741
HTATSF1 Felis catus ENSFCAG00000003458 N 0.741
HTATSF1 Cavia porcellus ENSCPOG00000010493 N 0.741
HTATSF1 Canis familiaris ENSCAFG00000023294 N 0.741
HTATSF1 Gorilla gorilla ENSGGOG00000026072 N 0.741
HTATSF1 Homo sapiens ENSG00000102241 N 0.741
HTATSF1 Macaca mulatta ENSMMUG00000006450 N 0.741
LOC100414869 Callithrix jacchus ENSCJAG00000003676 N 0.741
AAH84628 Xenopus laevis AAH84628 N 0.741
AAH59346 Xenopus laevis AAH59346 N 0.741