LOC100054669 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000009156 T36593_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000007177 RRM 137 214
ENSECAP00000007177 RRM 289 345

Links

Other RRM family RBPs
Other Equus caballus RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R008048 Ailuropoda melanoleuca Ame_R008048 N 0.993
HTATSF1 Canis familiaris ENSCAFG00000023294 N 0.993
HTATSF1 Macaca mulatta ENSMMUG00000006450 N 0.985
HTATSF1 Felis catus ENSFCAG00000003458 N 0.985
ENSPPYG00000020765 Pongo pygmaeus ENSPPYG00000020765 N 0.985
HTATSF1 Pteropus vampyrus ENSPVAG00000010281 N 0.985
LOC100414869 Callithrix jacchus ENSCJAG00000003676 N 0.985
HTATSF1 Gorilla gorilla ENSGGOG00000026072 N 0.985
HTATSF1 Homo sapiens ENSG00000102241 N 0.985
HTATSF1 Oryctolagus cuniculus ENSOCUG00000012570 N 0.978
HTATSF1 Dasypus novemcinctus ENSDNOG00000002254 N 0.970
HTATSF1 Myotis lucifugus ENSMLUG00000009234 N 0.970
HTATSF1 Loxodonta africana ENSLAFG00000014307 N 0.963
HTATSF1 Tursiops truncatus ENSTTRG00000002269 N 0.963
Htatsf1 Dipodomys ordii ENSDORG00000006140 N 0.956
HTATSF1 Cavia porcellus ENSCPOG00000010493 N 0.956
Htatsf1 Rattus norvegicus ENSRNOG00000027761 N 0.956
Htatsf1 Mus musculus ENSMUSG00000067873 N 0.956
HTATSF1 Sorex araneus ENSSARG00000005193 N 0.948
HTATSF1 Vicugna pacos ENSVPAG00000004569 N 0.859
HTATSF1 Macropus eugenii ENSMEUG00000004133 N 0.837
HTATSF1 Pan troglodytes ENSPTRG00000022315 N 0.837
Q2KIC3_BOVIN Bos taurus ENSBTAG00000008640 N 0.837
XM_001362552.1 Monodelphis domestica ENSMODG00000014087 N 0.830
HTATSF1 Ornithorhynchus anatinus ENSOANG00000011674 N 0.815
HTATSF1 Anolis carolinensis ENSACAG00000009346 N 0.793
HTATSF1 Taeniopygia guttata ENSTGUG00000002099 N 0.793
HTATSF1 Meleagris gallopavo ENSMGAG00000003558 N 0.793
Q5ZKD3_CHICK Gallus gallus ENSGALG00000006410 N 0.793
htatsf1 Xenopus tropicalis ENSXETG00000019749 N 0.770
AAH59346 Xenopus laevis AAH59346 N 0.741
AAH84628 Xenopus laevis AAH84628 N 0.741
HTATSF1 Takifugu rubripes ENSTRUG00000013383 N 0.741
HTATSF1 Tetraodon nigroviridis ENSTNIG00000016140 N 0.733
HTATSF1 Oryzias latipes ENSORLG00000002356 N 0.726
HTATSF1 Gasterosteus aculeatus ENSGACG00000020459 N 0.708
htatsf1 Danio rerio ENSDARG00000056649 N 0.704