CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
TRA2A
(
Vicugna pacos
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSVPAG00000001829
T42710_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000001685
RRM
121
177
LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEXX
Links
Other
RRM
family RBPs
Other
Vicugna pacos
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRA2A
Sorex araneus
ENSSARG00000012900
N
0.912
ENSDORG00000004468
Dipodomys ordii
ENSDORG00000004468
N
0.776
TRA2B
Macropus eugenii
ENSMEUG00000013768
N
0.776
ENSMLUG00000005781
Myotis lucifugus
ENSMLUG00000005781
N
0.776
TRA2B
Otolemur garnettii
ENSOGAG00000005386
N
0.776
TRA2A
Ornithorhynchus anatinus
ENSOANG00000014202
N
0.775
TRA2A
Oryctolagus cuniculus
ENSOCUG00000024139
N
0.775
Q8WMQ1_MACMU
Macaca mulatta
ENSMMUG00000006286
N
0.775
TRA2A
Myotis lucifugus
ENSMLUG00000013972
N
0.775
TRA2A
Monodelphis domestica
ENSMODG00000000807
N
0.775
Tra2a
Mus musculus
ENSMUSG00000029817
N
0.775
TRA2A
Otolemur garnettii
ENSOGAG00000009733
N
0.775
Tra2a
Rattus norvegicus
ENSRNOG00000009156
N
0.775
TRA2A
Sus scrofa
ENSSSCG00000015387
N
0.775
TRA2A
Tupaia belangeri
ENSTBEG00000013773
N
0.775
TRA2A
Pteropus vampyrus
ENSPVAG00000011298
N
0.775
TRA2A
Pan troglodytes
ENSPTRG00000018988
N
0.775
TRA2A
Ochotona princeps
ENSOPRG00000007606
N
0.775
TRA2A
Procavia capensis
ENSPCAG00000004148
N
0.775
ENSPPYG00000017728
Pongo pygmaeus
ENSPPYG00000017728
N
0.775
TRA2A
Loxodonta africana
ENSLAFG00000006598
N
0.775
TRA2A
Macropus eugenii
ENSMEUG00000001202
N
0.775
TRA2A
Choloepus hoffmanni
ENSCHOG00000001130
N
0.775
TRA2A
Gorilla gorilla
ENSGGOG00000009053
N
0.775
TRA2A
Cavia porcellus
ENSCPOG00000010739
N
0.775
TRA2A
Canis familiaris
ENSCAFG00000002788
N
0.775
Q2KJ71_BOVIN
Bos taurus
ENSBTAG00000012622
N
0.775
Ame_R009558
Ailuropoda melanoleuca
Ame_R009558
N
0.775
TRA2A
Anolis carolinensis
ENSACAG00000013502
N
0.775
Tra2a
Dipodomys ordii
ENSDORG00000009361
N
0.775
TRA2A
Callithrix jacchus
ENSCJAG00000001509
N
0.775
LOC100068009
Equus caballus
ENSECAG00000011508
N
0.775
TRA2A
Homo sapiens
ENSG00000164548
N
0.775
TRA2A
Echinops telfairi
ENSETEG00000007250
N
0.775
TRA2A
Erinaceus europaeus
ENSEEUG00000015674
N
0.775
estExt_fgenesh2_pg.C_2170043
Branchiostoma floridae
estExt_fgenesh2_pg.C_2170043
N
0.772
estExt_fgenesh2_pg.C_2170050
Branchiostoma floridae
estExt_fgenesh2_pg.C_2170050
N
0.772
TRA2A
Tursiops truncatus
ENSTTRG00000008922
N
0.761
TRA2A
Taeniopygia guttata
ENSTGUG00000002795
N
0.761
Q5ZLY6_CHICK
Gallus gallus
ENSGALG00000010973
N
0.761
TRA2A
Meleagris gallopavo
ENSMGAG00000010514
N
0.761
TRA2A
Gasterosteus aculeatus
ENSGACG00000006878
N
0.746
tra2a
Xenopus tropicalis
ENSXETG00000007397
N
0.732
tra2a
Danio rerio
ENSDARG00000007863
N
0.718
TRA2A
Spermophilus tridecemlineatus
ENSSTOG00000012073
N
0.718
AAH73641
Xenopus laevis
AAH73641
N
0.704
AAH44990
Xenopus laevis
AAH44990
N
0.704