tra2a (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000007397 T42848_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000016108 RRM 116 186

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TRA2A Anolis carolinensis ENSACAG00000013502 N 0.958
AAH44990 Xenopus laevis AAH44990 N 0.958
TRA2A Homo sapiens ENSG00000164548 N 0.944
Q5ZLY6_CHICK Gallus gallus ENSGALG00000010973 N 0.944
TRA2A Gorilla gorilla ENSGGOG00000009053 N 0.944
TRA2A Pan troglodytes ENSPTRG00000018988 N 0.944
TRA2A Echinops telfairi ENSETEG00000007250 N 0.944
LOC100068009 Equus caballus ENSECAG00000011508 N 0.944
TRA2A Ochotona princeps ENSOPRG00000007606 N 0.944
TRA2A Erinaceus europaeus ENSEEUG00000015674 N 0.944
TRA2A Ornithorhynchus anatinus ENSOANG00000014202 N 0.944
TRA2A Otolemur garnettii ENSOGAG00000009733 N 0.944
TRA2A Macropus eugenii ENSMEUG00000001202 N 0.944
Q8WMQ1_MACMU Macaca mulatta ENSMMUG00000006286 N 0.944
TRA2A Monodelphis domestica ENSMODG00000000807 N 0.944
Tra2a Mus musculus ENSMUSG00000029817 N 0.944
TRA2A Procavia capensis ENSPCAG00000004148 N 0.944
TRA2A Myotis lucifugus ENSMLUG00000013972 N 0.944
Tra2a Dipodomys ordii ENSDORG00000009361 N 0.944
TRA2A Meleagris gallopavo ENSMGAG00000010514 N 0.944
ENSPPYG00000017728 Pongo pygmaeus ENSPPYG00000017728 N 0.944
TRA2A Loxodonta africana ENSLAFG00000006598 N 0.944
TRA2A Pteropus vampyrus ENSPVAG00000011298 N 0.944
TRA2A Callithrix jacchus ENSCJAG00000001509 N 0.944
Q2KJ71_BOVIN Bos taurus ENSBTAG00000012622 N 0.944
TRA2A Canis familiaris ENSCAFG00000002788 N 0.944
TRA2A Choloepus hoffmanni ENSCHOG00000001130 N 0.944
TRA2A Oryctolagus cuniculus ENSOCUG00000024139 N 0.944
Tra2a Rattus norvegicus ENSRNOG00000009156 N 0.944
TRA2A Sus scrofa ENSSSCG00000015387 N 0.944
TRA2A Tupaia belangeri ENSTBEG00000013773 N 0.944
TRA2A Taeniopygia guttata ENSTGUG00000002795 N 0.944
TRA2A Cavia porcellus ENSCPOG00000010739 N 0.944
Ame_R009558 Ailuropoda melanoleuca Ame_R009558 N 0.944
TRA2A Tursiops truncatus ENSTTRG00000008922 N 0.930
AAH73641 Xenopus laevis AAH73641 N 0.915
TRA2A Gasterosteus aculeatus ENSGACG00000006878 N 0.915
tra2a Danio rerio ENSDARG00000007863 N 0.887
TRA2A Spermophilus tridecemlineatus ENSSTOG00000012073 N 0.887
ENSGACG00000010109 Gasterosteus aculeatus ENSGACG00000010109 N 0.845
Q6I6X8_ORYLA Oryzias latipes ENSORLG00000013780 N 0.831
ENSTNIG00000017210 Tetraodon nigroviridis ENSTNIG00000017210 N 0.831
ENSTRUG00000015168 Takifugu rubripes ENSTRUG00000015168 N 0.831
tra2b Danio rerio ENSDARG00000002168 N 0.817
SFRS10 Taeniopygia guttata ENSTGUG00000017023 N 0.775
Q9DDU8_CHICK Gallus gallus ENSGALG00000006531 N 0.775
AAH72952 Xenopus laevis AAH72952 N 0.775
SFRS10 Taeniopygia guttata ENSTGUG00000006742 N 0.775
ENSMGAG00000002853 Meleagris gallopavo ENSMGAG00000002853 N 0.775
TRA2A Oryzias latipes ENSORLG00000004667 N 0.761
TRA2B Ochotona princeps ENSOPRG00000007990 N 0.761
TRA2B Pteropus vampyrus ENSPVAG00000008615 N 0.761
TRA2B Sorex araneus ENSSARG00000007638 N 0.761
Tra2b Rattus norvegicus ENSRNOG00000001783 N 0.761
TRA2B Pan troglodytes ENSPTRG00000015707 N 0.761
ENSPPYG00000014374 Pongo pygmaeus ENSPPYG00000014374 N 0.761
TRA2B Tarsius syrichta ENSTSYG00000000652 N 0.761
TRA2B Loxodonta africana ENSLAFG00000017165 N 0.761
LOC100398526 Callithrix jacchus ENSCJAG00000014710 N 0.761
TRA2B Cavia porcellus ENSCPOG00000006313 N 0.761
TRA2B Vicugna pacos ENSVPAG00000012015 N 0.761
LOC100067887 Equus caballus ENSECAG00000012701 N 0.761
TRA2B Canis familiaris ENSCAFG00000013345 N 0.761
TRA2B_BOVIN Bos taurus ENSBTAG00000001697 N 0.761
Ame_R003489 Ailuropoda melanoleuca Ame_R003489 N 0.761
AAH44695 Xenopus laevis AAH44695 N 0.761
AAI08874 Xenopus laevis AAI08874 N 0.761
TRA2B Anolis carolinensis ENSACAG00000008084 N 0.761
TRA2B Erinaceus europaeus ENSEEUG00000009822 N 0.761
TRA2B Felis catus ENSFCAG00000010526 N 0.761
TRA2B Tursiops truncatus ENSTTRG00000008243 N 0.761
TRA2B Monodelphis domestica ENSMODG00000013248 N 0.761
Tra2b Mus musculus ENSMUSG00000022858 N 0.761
TRA2B Ornithorhynchus anatinus ENSOANG00000013953 N 0.761
Q8WMQ0_MACMU Macaca mulatta ENSMMUG00000001185 N 0.761
tra2b Xenopus tropicalis ENSXETG00000007511 N 0.761
TRA2B Homo sapiens ENSG00000136527 D 0.761
TRA2B Gorilla gorilla ENSGGOG00000009844 N 0.761
TRA2B Microcebus murinus ENSMICG00000010611 N 0.761
TRA2B Oryctolagus cuniculus ENSOCUG00000008940 N 0.761
TRA2B Myotis lucifugus ENSMLUG00000008670 N 0.746
ENSDNOG00000011679 Dasypus novemcinctus ENSDNOG00000011679 N 0.746
TRA2B Gasterosteus aculeatus ENSGACG00000005986 N 0.746
Q6I6X6_ORYLA Oryzias latipes ENSORLG00000016554 N 0.746
TRA2A Vicugna pacos ENSVPAG00000001829 N 0.732
TRA2B Tupaia belangeri ENSTBEG00000015927 N 0.718
TRA2A Sorex araneus ENSSARG00000012900 N 0.704
D3ZLN0_RAT Rattus norvegicus ENSRNOG00000002201 N 0.704
ENSMODG00000009767 Monodelphis domestica ENSMODG00000009767 N 0.704