CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRA2A
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000009053
T37826_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000008853
RRM
121
191
LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
ENSGGOP00000019637
RRM
121
191
LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
ENSGGOP00000026589
RRM
121
191
LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
94 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRA2A
Pan troglodytes
ENSPTRG00000018988
N
1.000
TRA2A
Pteropus vampyrus
ENSPVAG00000011298
N
1.000
TRA2A
Echinops telfairi
ENSETEG00000007250
N
1.000
TRA2A
Erinaceus europaeus
ENSEEUG00000015674
N
1.000
ENSPPYG00000017728
Pongo pygmaeus
ENSPPYG00000017728
N
1.000
TRA2A
Procavia capensis
ENSPCAG00000004148
N
1.000
TRA2A
Otolemur garnettii
ENSOGAG00000009733
N
1.000
TRA2A
Ochotona princeps
ENSOPRG00000007606
N
1.000
TRA2A
Homo sapiens
ENSG00000164548
N
1.000
TRA2A
Sus scrofa
ENSSSCG00000015387
N
1.000
TRA2A
Tupaia belangeri
ENSTBEG00000013773
N
1.000
TRA2A
Canis familiaris
ENSCAFG00000002788
N
1.000
TRA2A
Choloepus hoffmanni
ENSCHOG00000001130
N
1.000
TRA2A
Callithrix jacchus
ENSCJAG00000001509
N
1.000
TRA2A
Cavia porcellus
ENSCPOG00000010739
N
1.000
Q2KJ71_BOVIN
Bos taurus
ENSBTAG00000012622
N
1.000
Ame_R009558
Ailuropoda melanoleuca
Ame_R009558
N
1.000
LOC100068009
Equus caballus
ENSECAG00000011508
N
1.000
Tra2a
Dipodomys ordii
ENSDORG00000009361
N
1.000
TRA2A
Oryctolagus cuniculus
ENSOCUG00000024139
N
1.000
Tra2a
Rattus norvegicus
ENSRNOG00000009156
N
1.000
TRA2A
Macropus eugenii
ENSMEUG00000001202
N
1.000
Q8WMQ1_MACMU
Macaca mulatta
ENSMMUG00000006286
N
1.000
Tra2a
Mus musculus
ENSMUSG00000029817
N
1.000
TRA2A
Loxodonta africana
ENSLAFG00000006598
N
1.000
TRA2A
Ornithorhynchus anatinus
ENSOANG00000014202
N
1.000
TRA2A
Myotis lucifugus
ENSMLUG00000013972
N
1.000
TRA2A
Monodelphis domestica
ENSMODG00000000807
N
1.000
TRA2A
Anolis carolinensis
ENSACAG00000013502
N
0.986
TRA2A
Tursiops truncatus
ENSTTRG00000008922
N
0.986
TRA2A
Taeniopygia guttata
ENSTGUG00000002795
N
0.972
TRA2A
Meleagris gallopavo
ENSMGAG00000010514
N
0.972
Q5ZLY6_CHICK
Gallus gallus
ENSGALG00000010973
N
0.972
TRA2A
Gasterosteus aculeatus
ENSGACG00000006878
N
0.972
tra2a
Xenopus tropicalis
ENSXETG00000007397
N
0.944
tra2a
Danio rerio
ENSDARG00000007863
N
0.944
TRA2A
Spermophilus tridecemlineatus
ENSSTOG00000012073
N
0.944
AAH44990
Xenopus laevis
AAH44990
N
0.901
AAH73641
Xenopus laevis
AAH73641
N
0.873
ENSGACG00000010109
Gasterosteus aculeatus
ENSGACG00000010109
N
0.873
tra2b
Danio rerio
ENSDARG00000002168
N
0.845
Q6I6X8_ORYLA
Oryzias latipes
ENSORLG00000013780
N
0.845
AAH72952
Xenopus laevis
AAH72952
N
0.831
ENSTNIG00000017210
Tetraodon nigroviridis
ENSTNIG00000017210
N
0.831
ENSTRUG00000015168
Takifugu rubripes
ENSTRUG00000015168
N
0.831
TRA2B_BOVIN
Bos taurus
ENSBTAG00000001697
N
0.817
Tra2b
Mus musculus
ENSMUSG00000022858
N
0.817
ENSPPYG00000014374
Pongo pygmaeus
ENSPPYG00000014374
N
0.817
TRA2B
Pan troglodytes
ENSPTRG00000015707
N
0.817
TRA2B
Anolis carolinensis
ENSACAG00000008084
N
0.817
TRA2B
Pteropus vampyrus
ENSPVAG00000008615
N
0.817
AAI08874
Xenopus laevis
AAI08874
N
0.817
TRA2B
Canis familiaris
ENSCAFG00000013345
N
0.817
TRA2B
Loxodonta africana
ENSLAFG00000017165
N
0.817
TRA2B
Ornithorhynchus anatinus
ENSOANG00000013953
N
0.817
TRA2B
Ochotona princeps
ENSOPRG00000007990
N
0.817
TRA2B
Gorilla gorilla
ENSGGOG00000009844
N
0.817
TRA2B
Cavia porcellus
ENSCPOG00000006313
N
0.817
TRA2B
Homo sapiens
ENSG00000136527
D
0.817
LOC100398526
Callithrix jacchus
ENSCJAG00000014710
N
0.817
TRA2B
Monodelphis domestica
ENSMODG00000013248
N
0.817
Tra2b
Rattus norvegicus
ENSRNOG00000001783
N
0.817
TRA2B
Tursiops truncatus
ENSTTRG00000008243
N
0.817
TRA2B
Sorex araneus
ENSSARG00000007638
N
0.817
TRA2B
Tarsius syrichta
ENSTSYG00000000652
N
0.817
TRA2B
Oryctolagus cuniculus
ENSOCUG00000008940
N
0.817
LOC100067887
Equus caballus
ENSECAG00000012701
N
0.817
Q8WMQ0_MACMU
Macaca mulatta
ENSMMUG00000001185
N
0.817
TRA2B
Erinaceus europaeus
ENSEEUG00000009822
N
0.817
TRA2B
Vicugna pacos
ENSVPAG00000012015
N
0.817
TRA2B
Felis catus
ENSFCAG00000010526
N
0.817
AAH44695
Xenopus laevis
AAH44695
N
0.817
Ame_R003489
Ailuropoda melanoleuca
Ame_R003489
N
0.817
TRA2B
Microcebus murinus
ENSMICG00000010611
N
0.817
tra2b
Xenopus tropicalis
ENSXETG00000007511
N
0.817
ENSDNOG00000011679
Dasypus novemcinctus
ENSDNOG00000011679
N
0.803
Q9DDU8_CHICK
Gallus gallus
ENSGALG00000006531
N
0.803
SFRS10
Taeniopygia guttata
ENSTGUG00000006742
N
0.803
SFRS10
Taeniopygia guttata
ENSTGUG00000017023
N
0.803
ENSMGAG00000002853
Meleagris gallopavo
ENSMGAG00000002853
N
0.803
TRA2B
Myotis lucifugus
ENSMLUG00000008670
N
0.789
TRA2B
Gasterosteus aculeatus
ENSGACG00000005986
N
0.775
TRA2A
Vicugna pacos
ENSVPAG00000001829
N
0.775
Q6I6X6_ORYLA
Oryzias latipes
ENSORLG00000016554
N
0.775
D3ZLN0_RAT
Rattus norvegicus
ENSRNOG00000002201
N
0.761
TRA2B
Tupaia belangeri
ENSTBEG00000015927
N
0.761
ENSMODG00000009767
Monodelphis domestica
ENSMODG00000009767
N
0.746
TRA2A
Oryzias latipes
ENSORLG00000004667
N
0.746
ENSMODG00000015264
Monodelphis domestica
ENSMODG00000015264
N
0.718
TRA2A
Sorex araneus
ENSSARG00000012900
N
0.718
Tra2b
Rattus norvegicus
ENSRNOG00000005867
N
0.718
ISCW010309
Ixodes scapularis
ISCW010309
N
0.704
ENSDNOG00000018192
Dasypus novemcinctus
ENSDNOG00000018192
N
0.704