ncl (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000009517 T42859_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000021025 RRM 242 310
ENSXETP00000021025 RRM 334 400
ENSXETP00000021025 RRM 424 489
ENSXETP00000021025 RRM 511 578

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CAA44805 Xenopus laevis CAA44805 N 0.944
P20397 Xenopus laevis P20397 N 0.944
CAA51460 Xenopus laevis CAA51460 N 0.922
AAI70091 Xenopus laevis AAI70091 N 0.919
AAI70089 Xenopus laevis AAI70089 N 0.915
NCL Anolis carolinensis ENSACAG00000001006 N 0.720
NCL Ornithorhynchus anatinus ENSOANG00000008732 I 0.705
NCL Monodelphis domestica ENSMODG00000002470 I 0.705
NCL Macropus eugenii ENSMEUG00000012335 I 0.701