rbm16 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000013132 T42888_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000028751 RRM 476 539

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH89292 Xenopus laevis AAH89292 N 1.000
SCAF8 Monodelphis domestica ENSMODG00000008301 N 0.910
Rbm16 Rattus norvegicus ENSRNOG00000016919 N 0.896
SCAF8 Meleagris gallopavo ENSMGAG00000012762 N 0.896
RBM16 Taeniopygia guttata ENSTGUG00000011151 N 0.896
RBM16 Gallus gallus ENSGALG00000013635 N 0.896
SCAF8 Anolis carolinensis ENSACAG00000005282 N 0.896
Scaf8 Mus musculus ENSMUSG00000046201 N 0.896
SCAF8 Ochotona princeps ENSOPRG00000018413 N 0.881
SCAF8 Oryctolagus cuniculus ENSOCUG00000026063 N 0.881
SCAF8 Pteropus vampyrus ENSPVAG00000005582 N 0.881
SCAF8 Vicugna pacos ENSVPAG00000012465 N 0.881
SCAF8 Sus scrofa ENSSSCG00000004070 N 0.881
SCAF8 Pan troglodytes ENSPTRG00000018727 N 0.881
ENSPPYG00000017121 Pongo pygmaeus ENSPPYG00000017121 N 0.881
SCAF8 Macaca mulatta ENSMMUG00000015163 N 0.881
LOC100061852 Equus caballus ENSECAG00000005540 N 0.881
ENSCPOG00000022216 Cavia porcellus ENSCPOG00000022216 N 0.881
LOC100390484 Callithrix jacchus ENSCJAG00000012631 N 0.881
Q6JDJ9_CANFA Canis familiaris ENSCAFG00000000570 N 0.881
Ame_R017029 Ailuropoda melanoleuca Ame_R017029 N 0.881
SCAF8 Homo sapiens ENSG00000213079 N 0.881
SCAF8 Gorilla gorilla ENSGGOG00000008645 N 0.881
SCAF8 Loxodonta africana ENSLAFG00000000022 N 0.881
SCAF8 Danio rerio ENSDARG00000074786 N 0.866
SCAF8 Oryzias latipes ENSORLG00000017358 N 0.862
SCAF8 Takifugu rubripes ENSTRUG00000009243 N 0.851
SCAF8 Tetraodon nigroviridis ENSTNIG00000016885 N 0.851
SCAF8 Gasterosteus aculeatus ENSGACG00000006909 N 0.851
SCAF8 Procavia capensis ENSPCAG00000013044 N 0.824