CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CG18178
(
Drosophila melanogaster
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0036035
T43066_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0076141
RRM
125
164
LVLKSTKPRQKHARFCLVDFKSKEDRDQAFKDIKASIEKD
FBpp0076141
RRM
220
282
VVITNLPKTSSLPQVRQLFHDQAVDIQIRPGKGKFRDYSTATVTLPTTHDARKAIKEKLSLAG
Links
Other
RRM
family RBPs
Other
Drosophila melanogaster
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE21215
Drosophila yakuba
FBgn0068368
N
0.952
GG14013
Drosophila erecta
FBgn0106275
N
0.924
GD12899
Drosophila simulans
FBgn0184624
N
0.914
GM24847
Drosophila sechellia
FBgn0179709
N
0.907
GL17875
Drosophila persimilis
FBgn0155478
N
0.773
GA14827-RA
Drosophila pseudoobscura
FBgn0074854
N
0.773
GF25131
Drosophila ananassae
FBgn0102123
N
0.709