CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF25131
(
Drosophila ananassae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0102123
T43311_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0128323
RRM
126
168
LHPLVVKSTKPRQKHARFCLVDFETPENRDKAYEDIKSSIQND
FBpp0128323
RRM
224
288
IVITNLPKTSSVAQVRQLFTDAVDIQIRPGKGKFREFSAATVTLPTSHDARSAIKKKLSLSGTEL
Links
Other
RRM
family RBPs
Other
Drosophila ananassae
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GA14827-RA
Drosophila pseudoobscura
FBgn0074854
N
0.780
GL17875
Drosophila persimilis
FBgn0155478
N
0.780
GE21215
Drosophila yakuba
FBgn0068368
N
0.727
GD12899
Drosophila simulans
FBgn0184624
N
0.727
GG14013
Drosophila erecta
FBgn0106275
N
0.727
GM24847
Drosophila sechellia
FBgn0179709
N
0.718
CG18178
Drosophila melanogaster
FBgn0036035
N
0.709