GA16117-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0076133 T43142_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
cpo
M125_0.6 		Drosophila melanogaster WGCACA RNAcompete
Ray et al.(2013)
RNCMPT00133 		0.957
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0284875 RRM 529 596

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cpo Drosophila melanogaster FBgn0000363 D 1.000
GI23706 Drosophila mojavensis FBgn0146431 I 1.000
AGAP013145 Anopheles gambiae AGAP013145 I 0.985
CPIJ012174 Culex quinquefasciatus CPIJ012174 I 0.971
CpipJ_CPIJ012174 Culex pipiens CpipJ_CPIJ012174 I 0.971
GF16747 Drosophila ananassae FBgn0093768 I 0.957
GD19192 Drosophila simulans FBgn0190697 I 0.957
GH15012 Drosophila grimshawi FBgn0122487 I 0.957
GL12579 Drosophila persimilis FBgn0150185 I 0.957
GM15269 Drosophila sechellia FBgn0170189 I 0.957
XP_794412.2 Strongylocentrotus purpuratus XP_794412.2 I 0.757
XP_001190727.1 Strongylocentrotus purpuratus XP_001190727.1 I 0.757
e_gw.368.37.1 Branchiostoma floridae e_gw.368.37.1 I 0.704