e_gw.368.37.1 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw.368.37.1 T50196_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
cpo
M125_0.6 		Drosophila melanogaster WGCACA RNAcompete
Ray et al.(2013)
RNCMPT00133 		0.841
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw.368.37.1 RRM 4 67

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBPMS2 Taeniopygia guttata ENSTGUG00000004722 N 0.800
RBPMS2 Monodelphis domestica ENSMODG00000010487 N 0.800
RBPMS_CHICK Gallus gallus ENSGALG00000002355 N 0.800
rbpms2 Danio rerio ENSDARG00000079578 N 0.800
RBPMS2 Ornithorhynchus anatinus ENSOANG00000011802 N 0.800
RBPMS2 Meleagris gallopavo ENSMGAG00000001128 N 0.800
RBPMS2 Danio rerio ENSDARG00000045930 N 0.797
RBPMS2 Oryzias latipes ENSORLG00000001493 N 0.797
RBPMS2 Anolis carolinensis ENSACAG00000012227 N 0.785
RBPMS2 Spermophilus tridecemlineatus ENSSTOG00000010055 N 0.785
AAH97507 Xenopus laevis AAH97507 N 0.785
AAH81153 Xenopus laevis AAH81153 N 0.785
AAD16971 Xenopus laevis AAD16971 N 0.785
ENSXETG00000010668 Xenopus tropicalis ENSXETG00000010668 N 0.785
Q9YGP5 Xenopus laevis Q9YGP5 N 0.785
RBPMS2 Takifugu rubripes ENSTRUG00000016625 N 0.785
RBPMS Gasterosteus aculeatus ENSGACG00000019471 N 0.781
RBPMS2 Gasterosteus aculeatus ENSGACG00000017472 N 0.781
RBPMS Oryzias latipes ENSORLG00000004135 N 0.781
RBPMS Takifugu rubripes ENSTRUG00000000041 N 0.781
RBPMS2 Macaca mulatta ENSMMUG00000013270 N 0.769
Ame_R002022 Ailuropoda melanoleuca Ame_R002022 N 0.769
RBPMS2 Loxodonta africana ENSLAFG00000018725 N 0.769
RBPMS2 Pan troglodytes ENSPTRG00000007165 N 0.769
Rbpms2 Rattus norvegicus ENSRNOG00000015896 N 0.769
RBPMS2 Sus scrofa ENSSSCG00000004549 N 0.769
RBPMS2 Tursiops truncatus ENSTTRG00000011840 N 0.769
RBPMS2 Pteropus vampyrus ENSPVAG00000016622 N 0.769
RBPMS2 Gorilla gorilla ENSGGOG00000008984 N 0.769
RBPMS2 Oryctolagus cuniculus ENSOCUG00000010388 N 0.769
RBPMS2 Procavia capensis ENSPCAG00000015797 N 0.769
Rbpms2 Mus musculus ENSMUSG00000032387 N 0.769
RBPMS2 Myotis lucifugus ENSMLUG00000013394 N 0.769
RBPMS2 Canis familiaris ENSCAFG00000017098 N 0.769
RBPMS2 Felis catus ENSFCAG00000011333 N 0.769
A5YBM9_HORSE Equus caballus ENSECAG00000015345 N 0.769
RBPMS2 Cavia porcellus ENSCPOG00000007695 N 0.769
LOC100409527 Callithrix jacchus ENSCJAG00000005200 N 0.769
RBPMS2 Homo sapiens ENSG00000166831 N 0.769
RBPMS2 Bos taurus ENSBTAG00000011037 N 0.769
RGD1561067 Rattus norvegicus ENSRNOG00000013328 N 0.766
RBPMS Pteropus vampyrus ENSPVAG00000001661 N 0.766
RBPMS Pan troglodytes ENSPTRG00000020135 N 0.766
RBPMS Sorex araneus ENSSARG00000000274 N 0.766
RBPMS Choloepus hoffmanni ENSCHOG00000008745 N 0.766
Q2KI55_BOVIN Bos taurus ENSBTAG00000033727 N 0.766
RBPMS Vicugna pacos ENSVPAG00000010991 N 0.766
Ame_R009021 Ailuropoda melanoleuca Ame_R009021 N 0.766
rbpms Xenopus tropicalis ENSXETG00000011290 N 0.766
AAH60391 Xenopus laevis AAH60391 N 0.766
RBPMS Anolis carolinensis ENSACAG00000003012 N 0.766
RBPMS Sus scrofa ENSSSCG00000015846 N 0.766
RBPMS Gallus gallus ENSGALG00000010291 N 0.766
RBPMS Taeniopygia guttata ENSTGUG00000001776 N 0.766
RBPMS Canis familiaris ENSCAFG00000006503 N 0.766
ENSPPYG00000018487 Pongo pygmaeus ENSPPYG00000018487 N 0.766
LOC100392847 Callithrix jacchus ENSCJAG00000012366 N 0.766
RBPMS Echinops telfairi ENSETEG00000017582 N 0.766
RBPMS Monodelphis domestica ENSMODG00000019006 N 0.766
RBPMS Myotis lucifugus ENSMLUG00000009391 N 0.766
RBPMS Meleagris gallopavo ENSMGAG00000005088 N 0.766
RBPMS Loxodonta africana ENSLAFG00000000209 N 0.766
RBPMS Homo sapiens ENSG00000157110 N 0.766
Rbpms Mus musculus ENSMUSG00000031586 N 0.766
RBPMS Macaca mulatta ENSMMUG00000000458 N 0.766
RBPMS Ochotona princeps ENSOPRG00000013151 N 0.766
RBPMS Cavia porcellus ENSCPOG00000012799 N 0.766
RBPMS Equus caballus ENSECAG00000020735 N 0.766
RBPMS Oryctolagus cuniculus ENSOCUG00000008572 N 0.766
RBPMS Procavia capensis ENSPCAG00000013493 N 0.766
RBPMS2 Ochotona princeps ENSOPRG00000013668 N 0.758
Rbpms2 Dipodomys ordii ENSDORG00000004025 N 0.758
RBPMS2 Microcebus murinus ENSMICG00000007355 N 0.754
RBPMS2 Echinops telfairi ENSETEG00000010176 N 0.754
ISCW022577 Ixodes scapularis ISCW022577 I 0.754
RBPMS Tarsius syrichta ENSTSYG00000013982 N 0.750
RBPMS Tursiops truncatus ENSTTRG00000012451 N 0.750
GI23706 Drosophila mojavensis FBgn0146431 I 0.704
cpo Drosophila melanogaster FBgn0000363 D 0.704
AGAP013145 Anopheles gambiae AGAP013145 I 0.704
GA16117-RA Drosophila pseudoobscura FBgn0076133 I 0.704